RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 IL1RAPL2Q9NP60 686 aa23.71■■□□□ 1.39
UPK3B-205ENST00000490360 FBXO28Q9NVF7 368 aa23.71■■□□□ 1.39
UPK3B-205ENST00000490360 IFIT2P09913 472 aaKnown RBP23.7■■□□□ 1.38
UPK3B-205ENST00000490360 KCNA10Q16322 511 aa23.7■■□□□ 1.38
UPK3B-205ENST00000490360 CCSAPQ6IQ19 270 aaPredicted RBP23.7■■□□□ 1.38
UPK3B-205ENST00000490360 REPS2Q8NFH8 660 aa23.7■■□□□ 1.38
UPK3B-205ENST00000490360 KIF1BPQ96EK5 621 aa23.7■■□□□ 1.38
UPK3B-205ENST00000490360 DDX11Q96FC9 970 aa23.7■■□□□ 1.38
UPK3B-205ENST00000490360 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.7■■□□□ 1.38
UPK3B-205ENST00000490360 MYO9BQ13459 2157 aa23.69■■□□□ 1.38
UPK3B-205ENST00000490360 MBD4O95243 580 aa23.69■■□□□ 1.38
UPK3B-205ENST00000490360 TMEM199Q8N511 208 aa23.69■■□□□ 1.38
UPK3B-205ENST00000490360 USP38Q8NB14 1042 aa23.69■■□□□ 1.38
UPK3B-205ENST00000490360 NCOR1O75376 2440 aa23.68■■□□□ 1.38
UPK3B-205ENST00000490360 USP17L12C9JPN9 530 aa23.68■■□□□ 1.38
UPK3B-205ENST00000490360 USP17L21D6R901 530 aa23.68■■□□□ 1.38
UPK3B-205ENST00000490360 ADD2P35612 726 aa23.68■■□□□ 1.38
UPK3B-205ENST00000490360 CDK7P50613 346 aa23.68■■□□□ 1.38
UPK3B-205ENST00000490360 RASIP1Q5U651 963 aa23.68■■□□□ 1.38
UPK3B-205ENST00000490360 PSRC1Q6PGN9 363 aaPredicted RBP23.68■■□□□ 1.38
UPK3B-205ENST00000490360 SLF1Q9BQI6 1058 aa23.68■■□□□ 1.38
UPK3B-205ENST00000490360 DNAJC25-GNG10A0A024R161 153 aa23.67■■□□□ 1.38
UPK3B-205ENST00000490360 ATP2A1O14983 1001 aa23.67■■□□□ 1.38
UPK3B-205ENST00000490360 PRKAB2O43741 272 aa23.67■■□□□ 1.38
UPK3B-205ENST00000490360 SNAI1O95863 264 aaPredicted RBP23.67■■□□□ 1.38
UPK3B-205ENST00000490360 RLBP1P12271 317 aa23.67■■□□□ 1.38
UPK3B-205ENST00000490360 FAM83BQ5T0W9 1011 aa23.67■■□□□ 1.38
UPK3B-205ENST00000490360 CCDC129Q6ZRS4 1044 aa23.67■■□□□ 1.38
UPK3B-205ENST00000490360 LENG1Q96BZ8 264 aaPredicted RBP23.67■■□□□ 1.38
UPK3B-205ENST00000490360 PAG1Q9NWQ8 432 aa23.67■■□□□ 1.38
UPK3B-205ENST00000490360 ZHX1Q9UKY1 873 aaPredicted RBP23.67■■□□□ 1.38
UPK3B-205ENST00000490360 TLR3O15455 904 aaKnown RBP23.66■■□□□ 1.38
UPK3B-205ENST00000490360 RAD21O60216 631 aa23.66■■□□□ 1.38
UPK3B-205ENST00000490360 COL9A1P20849 921 aa23.66■■□□□ 1.38
UPK3B-205ENST00000490360 TMEM240Q5SV17 173 aa23.66■■□□□ 1.38
UPK3B-205ENST00000490360 SNRNP48Q6IEG0 339 aaKnown RBP23.66■■□□□ 1.38
UPK3B-205ENST00000490360 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.66■■□□□ 1.38
UPK3B-205ENST00000490360 PRPF38AQ8NAV1 312 aaKnown RBP23.66■■□□□ 1.38
UPK3B-205ENST00000490360 PBX4Q9BYU1 374 aa23.66■■□□□ 1.38
UPK3B-205ENST00000490360 MTIF3Q9H2K0 278 aaKnown RBP23.66■■□□□ 1.38
UPK3B-205ENST00000490360 ABHD16BQ9H3Z7 469 aa23.66■■□□□ 1.38
UPK3B-205ENST00000490360 THEGQ9P2T0 379 aa23.66■■□□□ 1.38
UPK3B-205ENST00000490360 A0A0U1RQG5 324 aaPredicted RBP23.65■■□□□ 1.38
UPK3B-205ENST00000490360 C6orf222P0C671 652 aaPredicted RBP23.65■■□□□ 1.38
UPK3B-205ENST00000490360 ACVR2BQ13705 512 aa23.65■■□□□ 1.38
UPK3B-205ENST00000490360 UBE3CQ15386 1083 aa23.65■■□□□ 1.38
UPK3B-205ENST00000490360 RAB30Q15771 203 aa23.65■■□□□ 1.38
UPK3B-205ENST00000490360 VTI1AQ96AJ9 217 aa23.65■■□□□ 1.38
UPK3B-205ENST00000490360 UPF3AQ9H1J1 476 aaKnown RBP23.65■■□□□ 1.38
UPK3B-205ENST00000490360 MSRAQ9UJ68 235 aa23.65■■□□□ 1.38
UPK3B-205ENST00000490360 ARVCFO00192 962 aa23.64■■□□□ 1.37
UPK3B-205ENST00000490360 HMMRO75330 724 aa23.64■■□□□ 1.37
UPK3B-205ENST00000490360 ASGR1P07306 291 aa23.64■■□□□ 1.37
UPK3B-205ENST00000490360 GJA9P57773 515 aa23.64■■□□□ 1.37
UPK3B-205ENST00000490360 ASB2Q96Q27 587 aa23.64■■□□□ 1.37
UPK3B-205ENST00000490360 ARPP21Q9UBL0 812 aaPredicted RBP23.64■■□□□ 1.37
UPK3B-205ENST00000490360 FBXO40Q9UH90 709 aa23.64■■□□□ 1.37
UPK3B-205ENST00000490360 CTDP1Q9Y5B0 961 aaPredicted RBP23.64■■□□□ 1.37
UPK3B-205ENST00000490360 CHD9Q3L8U1 2897 aa23.64■■□□□ 1.37
UPK3B-205ENST00000490360 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 CYP2D7A0A087X1C5 515 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 ZBED4O75132 1171 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 RAB11FIP3O75154 756 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 ATP5JP18859 108 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 MRPS5P82675 430 aaKnown RBP23.63■■□□□ 1.37
UPK3B-205ENST00000490360 ZSCAN25Q6NSZ9 544 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 C16orf59Q7L2K0 433 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 SEZ6LQ9BYH1 1024 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.63■■□□□ 1.37
UPK3B-205ENST00000490360 NYAP2Q9P242 653 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 SLC4A4Q9Y6R1 1079 aa23.63■■□□□ 1.37
UPK3B-205ENST00000490360 CSF2RAP15509 400 aa23.62■■□□□ 1.37
UPK3B-205ENST00000490360 GNASQ5JWF2 1037 aa23.62■■□□□ 1.37
UPK3B-205ENST00000490360 CTR9Q6PD62 1173 aa23.62■■□□□ 1.37
UPK3B-205ENST00000490360 FAM126BQ8IXS8 530 aa23.62■■□□□ 1.37
UPK3B-205ENST00000490360 RPAP2Q8IXW5 612 aaPredicted RBP23.62■■□□□ 1.37
UPK3B-205ENST00000490360 MYH7P12883 1935 aa23.62■■□□□ 1.37
UPK3B-205ENST00000490360 F5H6K3 240 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 OAZ1P54368 228 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 NKX3-2P78367 333 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 KLRC3Q07444 240 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 CCDC144BQ3MJ40 725 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 ZNF365Q70YC5 407 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 CHST13Q8NET6 341 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 IL27Q8NEV9 243 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 HERVK_113Q902F9 699 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 HAUS7Q99871 368 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 PRDM12Q9H4Q4 367 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 IL23AQ9NPF7 189 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 RIPK3Q9Y572 518 aa23.61■■□□□ 1.37
UPK3B-205ENST00000490360 GREB1LQ9C091 1923 aaPredicted RBP23.61■■□□□ 1.37
UPK3B-205ENST00000490360 BDP1A6H8Y1 2624 aa23.6■■□□□ 1.37
UPK3B-205ENST00000490360 MYADML2A6NDP7 307 aa23.6■■□□□ 1.37
UPK3B-205ENST00000490360 MS4A1P11836 297 aa23.6■■□□□ 1.37
UPK3B-205ENST00000490360 PBX2P40425 430 aa23.6■■□□□ 1.37
UPK3B-205ENST00000490360 ANKRD35Q8N283 1001 aa23.6■■□□□ 1.37
UPK3B-205ENST00000490360 PPM1EQ8WY54 764 aa23.6■■□□□ 1.37
UPK3B-205ENST00000490360 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.6■■□□□ 1.37
UPK3B-205ENST00000490360 TSPYL2Q9H2G4 693 aaPredicted RBP23.6■■□□□ 1.37
UPK3B-205ENST00000490360 BOLA2Q9H3K6 86 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms