RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 CNKSR1Q969H4 720 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 PAGE5Q96GU1 130 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 MXD3Q9BW11 206 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 EHD4Q9H223 541 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 CRKP46108 304 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 ENOX1Q8TC92 643 aaKnown RBP18.28■□□□□ 0.52
SNX5-214ENST00000490175 GSDMAQ96QA5 445 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 RIOX1Q9H6W3 641 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 C6orf50Q9HD87 102 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 ADAMTSL1Q8N6G6 1762 aa18.28■□□□□ 0.52
SNX5-214ENST00000490175 SLX4Q8IY92 1834 aa18.27■□□□□ 0.52
SNX5-214ENST00000490175 SNHG28P0DPA3 235 aa18.27■□□□□ 0.52
SNX5-214ENST00000490175 PDHBP11177 359 aa18.27■□□□□ 0.52
SNX5-214ENST00000490175 ERCC5P28715 1186 aaPredicted RBP18.27■□□□□ 0.52
SNX5-214ENST00000490175 NAPAP54920 295 aa18.27■□□□□ 0.52
SNX5-214ENST00000490175 KRT25Q7Z3Z0 450 aa18.27■□□□□ 0.52
SNX5-214ENST00000490175 FILIP1Q7Z7B0 1213 aa18.27■□□□□ 0.52
SNX5-214ENST00000490175 GRAMD1CQ8IYS0 662 aa18.27■□□□□ 0.52
SNX5-214ENST00000490175 MYRIPQ8NFW9 859 aa18.27■□□□□ 0.52
SNX5-214ENST00000490175 GREB1LQ9C091 1923 aaPredicted RBP18.27■□□□□ 0.51
SNX5-214ENST00000490175 ESYT2A0FGR8 921 aa18.27■□□□□ 0.51
SNX5-214ENST00000490175 TTLL1O95922 423 aa18.27■□□□□ 0.51
SNX5-214ENST00000490175 AKR1B1P15121 316 aa18.27■□□□□ 0.51
SNX5-214ENST00000490175 TXLNAP40222 546 aa18.27■□□□□ 0.51
SNX5-214ENST00000490175 E2F4Q16254 413 aa18.27■□□□□ 0.51
SNX5-214ENST00000490175 DBNDD1Q9H9R9 158 aa18.27■□□□□ 0.51
SNX5-214ENST00000490175 ZNF646O15015 1829 aaPredicted RBP18.26■□□□□ 0.51
SNX5-214ENST00000490175 USP17L5A8MUK1 530 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 PRPHP41219 470 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 DPYDQ12882 1025 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 IL17AQ16552 155 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 SOGA3Q5TF21 947 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 CC2D2BQ6DHV5 1058 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 CCDC150Q8NCX0 1101 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 RASGRP4Q8TDF6 673 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 CCDC17Q96LX7 622 aa18.26■□□□□ 0.51
SNX5-214ENST00000490175 DHX36Q9H2U1 1008 aaKnown RBP18.26■□□□□ 0.51
SNX5-214ENST00000490175 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
SNX5-214ENST00000490175 SERPINC1P01008 464 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 ATP1A3P13637 1013 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 SHMT1P34896 483 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 SLC15A2Q16348 729 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 DACT2Q5SW24 774 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 FANCLQ9NW38 375 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 SMCO2A6NFE2 343 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 ECE2O60344 883 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 UBASH3AP57075 661 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 ORC2Q13416 577 aaPredicted RBP18.25■□□□□ 0.51
SNX5-214ENST00000490175 DTHD1Q6ZMT9 781 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 RASGRP2Q7LDG7 609 aa18.25■□□□□ 0.51
SNX5-214ENST00000490175 AFMP43652 599 aa18.24■□□□□ 0.51
SNX5-214ENST00000490175 NONOQ15233 471 aaKnown RBP eCLIP18.24■□□□□ 0.51
SNX5-214ENST00000490175 INF2Q27J81 1249 aa18.24■□□□□ 0.51
SNX5-214ENST00000490175 PDXDC2PQ6P474 469 aa18.24■□□□□ 0.51
SNX5-214ENST00000490175 TMC6Q7Z403 805 aa18.24■□□□□ 0.51
SNX5-214ENST00000490175 PIGSQ96S52 555 aa18.24■□□□□ 0.51
SNX5-214ENST00000490175 IDI2Q9BXS1 227 aa18.24■□□□□ 0.51
SNX5-214ENST00000490175 SCN9AQ15858 1988 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 SKILP12757 684 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 CCZ1BP86790 482 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 CCZ1P86791 482 aaPredicted RBP18.23■□□□□ 0.51
SNX5-214ENST00000490175 HOMER1Q86YM7 354 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 C7orf43Q8WVR3 580 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 CPVLQ9H3G5 476 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 STK32BQ9NY57 414 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 SERPINA10Q9UK55 444 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 ZNF18P17022 549 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 KCND1Q9NSA2 647 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 NFE2L3Q9Y4A8 694 aa18.23■□□□□ 0.51
SNX5-214ENST00000490175 GTPBP6O43824 516 aaPredicted RBP18.22■□□□□ 0.51
SNX5-214ENST00000490175 NRDCO43847 1150 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 FMR1Q06787 632 aaKnown RBP eCLIP18.22■□□□□ 0.516e-21■■■■■ 32.8
SNX5-214ENST00000490175 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 NFIAQ12857 509 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 CFAP100Q494V2 611 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 GPATCH4Q5T3I0 446 aaKnown RBP18.22■□□□□ 0.51
SNX5-214ENST00000490175 PPP1R18Q6NYC8 613 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 KIAA0825Q8IV33 1275 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
SNX5-214ENST00000490175 VAT1LQ9HCJ6 419 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 KCNQ5Q9NR82 932 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 MYH4Q9Y623 1939 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 GRIPAP1Q4V328 841 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 REXO1Q8N1G1 1221 aaKnown RBP18.22■□□□□ 0.51
SNX5-214ENST00000490175 AK8Q96MA6 479 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 CAMKK2Q96RR4 588 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 CCSER1Q9C0I3 900 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 UBA5Q9GZZ9 404 aa18.22■□□□□ 0.51
SNX5-214ENST00000490175 SFPQP23246 707 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNX5-214ENST00000490175 CHRNA5P30532 468 aa18.21■□□□□ 0.51
SNX5-214ENST00000490175 GTF2F1P35269 517 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNX5-214ENST00000490175 NEK8Q86SG6 692 aa18.21■□□□□ 0.51
SNX5-214ENST00000490175 RMND1Q9NWS8 449 aa18.21■□□□□ 0.51
SNX5-214ENST00000490175 PI4KBQ9UBF8 816 aa18.21■□□□□ 0.51
SNX5-214ENST00000490175 SIPA1L1O43166 1804 aa18.21■□□□□ 0.51
SNX5-214ENST00000490175 FRMPD2Q68DX3 1309 aaPredicted RBP18.21■□□□□ 0.51
SNX5-214ENST00000490175 MYL1P05976 194 aa18.2■□□□□ 0.5
SNX5-214ENST00000490175 KCNJ6P48051 423 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms