RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 TLR2O60603 784 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 OAZ1P54368 228 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 IRX3P78415 501 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-210ENST00000490081 APOBRQ0VD83 1088 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 MTMR8Q96EF0 704 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 ZSCAN31Q96LW9 406 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-210ENST00000490081 P2RX7Q99572 595 aaKnown RBP14.54□□□□□ -0.08
HDAC1-210ENST00000490081 SLF1Q9BQI6 1058 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 RIOX1Q9H6W3 641 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 ZFYVE28Q9HCC9 887 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 RNF186Q9NXI6 227 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 PNMA2Q9UL42 364 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 LIMCH1Q9UPQ0 1083 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 ADGRA2Q96PE1 1338 aa14.54□□□□□ -0.08
HDAC1-210ENST00000490081 A0A0G2JMZ2 1700 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 SPDYE16A6NNV3 312 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-210ENST00000490081 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 FLOT1O75955 427 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 HERVK_113P62684 666 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 TAF1CQ15572 869 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-210ENST00000490081 KCTD1Q719H9 257 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 NUP88Q99567 741 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-210ENST00000490081 SPZ1Q9BXG8 430 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 TANGO6Q9C0B7 1094 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 MAF1Q9H063 256 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 FAM217BQ9NTX9 383 aaPredicted RBP14.53□□□□□ -0.08
HDAC1-210ENST00000490081 MORF4L1Q9UBU8 362 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 RABGAP1Q9Y3P9 1069 aa14.53□□□□□ -0.08
HDAC1-210ENST00000490081 VWA5AO00534 786 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 PFKFB2O60825 505 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 CCDC96Q2M329 555 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 C17orf99Q6UX52 265 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 STAG2Q8N3U4 1231 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 REPS2Q8NFH8 660 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 SNX21Q969T3 373 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 SLC38A10Q9HBR0 1119 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 SH2B1Q9NRF2 756 aaPredicted RBP14.52□□□□□ -0.09
HDAC1-210ENST00000490081 RBPJLQ9UBG7 517 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 PRR12Q9ULL5 1215 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 TPCN1Q9ULQ1 816 aa14.52□□□□□ -0.09
HDAC1-210ENST00000490081 RAD21O60216 631 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 DHX16O60231 1041 aaKnown RBP14.51□□□□□ -0.09
HDAC1-210ENST00000490081 BCRP11274 1271 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 METAP2P50579 478 aaKnown RBP eCLIP14.51□□□□□ -0.09
HDAC1-210ENST00000490081 FUT2Q10981 343 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 NTRK3Q16288 839 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 RTN1Q16799 776 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 SYDE2Q5VT97 1194 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 TTBK2Q6IQ55 1244 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 POTEEQ6S8J3 1075 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 TMTC3Q6ZXV5 915 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 MICU3Q86XE3 530 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 NUP133Q8WUM0 1156 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 MCOLN1Q9GZU1 580 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 RANBP17Q9H2T7 1088 aaKnown RBP14.51□□□□□ -0.09
HDAC1-210ENST00000490081 GPCPD1Q9NPB8 672 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 FBXO28Q9NVF7 368 aa14.51□□□□□ -0.09
HDAC1-210ENST00000490081 COL11A1P12107 1806 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-210ENST00000490081 GOLGA8AA7E2F4 631 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 GOLGA8BA8MQT2 603 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 ZBED4O75132 1171 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 CYP2C8P10632 490 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 IFNAR1P17181 557 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 CDC27P30260 824 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 TRAF1Q13077 416 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 CRHR2Q13324 411 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 ME3Q16798 604 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 FAM110CQ1W6H9 321 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.5□□□□□ -0.09
HDAC1-210ENST00000490081 ADGRF4Q8IZF3 695 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 SMCR8Q8TEV9 937 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-210ENST00000490081 ATG4CQ96DT6 458 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 MYL10Q9BUA6 226 aa14.5□□□□□ -0.09
HDAC1-210ENST00000490081 SLKQ9H2G2 1235 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-210ENST00000490081 RBM27Q9P2N5 1060 aaKnown RBP14.5□□□□□ -0.09
HDAC1-210ENST00000490081 MYH6P13533 1939 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 FRMPD2Q68DX3 1309 aaPredicted RBP14.49□□□□□ -0.09
HDAC1-210ENST00000490081 BAZ2BQ9UIF8 2168 aaKnown RBP14.49□□□□□ -0.09
HDAC1-210ENST00000490081 CYTH3O43739 400 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 TRPA1O75762 1119 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 COPB2P35606 906 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 ADD1P35611 737 aaKnown RBP14.49□□□□□ -0.09
HDAC1-210ENST00000490081 RGS19P49795 217 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 SLC35G1Q2M3R5 365 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 RASGRP2Q7LDG7 609 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 TEX2Q8IWB9 1127 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 SRBD1Q8N5C6 995 aaKnown RBP14.49□□□□□ -0.09
HDAC1-210ENST00000490081 SHCBP1Q8NEM2 672 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 GPRC5AQ8NFJ5 357 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 JMJD4Q9H9V9 463 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 ZNF214Q9UL59 606 aaPredicted RBP14.49□□□□□ -0.09
HDAC1-210ENST00000490081 MTMR7Q9Y216 660 aa14.49□□□□□ -0.09
HDAC1-210ENST00000490081 PNMA6FA0A0J9YX94 578 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 ZBTB5O15062 677 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 CNMDO75829 334 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 SLC25A27O95847 323 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 ICAM1P05362 532 aa14.48□□□□□ -0.09
HDAC1-210ENST00000490081 SLC16A2P36021 539 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms