RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 A0A1W2PQY0 241 aa18.99■□□□□ 0.63
PLOD3-216ENST00000489927 NDUFB10O96000 172 aa18.99■□□□□ 0.63
PLOD3-216ENST00000489927 TSHZ3Q63HK5 1081 aa18.99■□□□□ 0.63
PLOD3-216ENST00000489927 TACC3Q9Y6A5 838 aa18.99■□□□□ 0.63
PLOD3-216ENST00000489927 CUL9Q8IWT3 2517 aa18.98■□□□□ 0.63
PLOD3-216ENST00000489927 ADAMTS4O75173 837 aa18.98■□□□□ 0.63
PLOD3-216ENST00000489927 CLTBP09497 229 aa18.98■□□□□ 0.63
PLOD3-216ENST00000489927 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.98■□□□□ 0.63
PLOD3-216ENST00000489927 PRPF38AQ8NAV1 312 aaKnown RBP18.98■□□□□ 0.63
PLOD3-216ENST00000489927 APPBP2Q92624 585 aa18.98■□□□□ 0.63
PLOD3-216ENST00000489927 EPB41L4AQ9HCS5 686 aaPredicted RBP18.98■□□□□ 0.63
PLOD3-216ENST00000489927 CLIP2Q9UDT6 1046 aa18.98■□□□□ 0.63
PLOD3-216ENST00000489927 SMCHD1A6NHR9 2005 aa18.98■□□□□ 0.63
PLOD3-216ENST00000489927 VCANP13611 3396 aa18.97■□□□□ 0.63
PLOD3-216ENST00000489927 IGKV6D-41A0A0C4DH26 115 aa18.97■□□□□ 0.63
PLOD3-216ENST00000489927 RNF113AO15541 343 aaKnown RBP18.97■□□□□ 0.63
PLOD3-216ENST00000489927 GPAA1O43292 621 aa18.97■□□□□ 0.63
PLOD3-216ENST00000489927 PQBP1O60828 265 aaKnown RBP18.97■□□□□ 0.63
PLOD3-216ENST00000489927 SNAI1O95863 264 aaPredicted RBP18.97■□□□□ 0.63
PLOD3-216ENST00000489927 MSL3Q8N5Y2 521 aaKnown RBP18.97■□□□□ 0.63
PLOD3-216ENST00000489927 DDX11Q96FC9 970 aa18.97■□□□□ 0.63
PLOD3-216ENST00000489927 CDX2Q99626 313 aaPredicted RBP18.97■□□□□ 0.63
PLOD3-216ENST00000489927 SEMA6BQ9H3T3 888 aa18.97■□□□□ 0.63
PLOD3-216ENST00000489927 SYNGAP1Q96PV0 1343 aa18.97■□□□□ 0.63
PLOD3-216ENST00000489927 SYNRGQ9UMZ2 1314 aa18.97■□□□□ 0.63
PLOD3-216ENST00000489927 DNAJC25-GNG10A0A024R161 153 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 M0R2C6 588 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 ATP2A1O14983 1001 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 KIAA0355O15063 1070 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 PRDM1O75626 825 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 SLC4A3P48751 1232 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 TDO2P48775 406 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 EPHB4P54760 987 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 SMAD3P84022 425 aaKnown RBP18.96■□□□□ 0.63
PLOD3-216ENST00000489927 MAMDC4Q6UXC1 1216 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 CPXCR1Q8N123 301 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 GPATCH3Q96I76 525 aa18.96■□□□□ 0.63
PLOD3-216ENST00000489927 ZHX1Q9UKY1 873 aaPredicted RBP18.96■□□□□ 0.63
PLOD3-216ENST00000489927 ZBED4O75132 1171 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 RAG1P15918 1043 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 ACLYP53396 1101 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
PLOD3-216ENST00000489927 MKL1Q969V6 931 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 KIFC2Q96AC6 838 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 CEP95Q96GE4 821 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 TSEN34Q9BSV6 310 aaKnown RBP18.95■□□□□ 0.62
PLOD3-216ENST00000489927 COL25A1Q9BXS0 654 aaPredicted RBP18.95■□□□□ 0.62
PLOD3-216ENST00000489927 TTYH1Q9H313 450 aaPredicted RBP18.95■□□□□ 0.62
PLOD3-216ENST00000489927 DCTPP1Q9H773 170 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 RAVER2Q9HCJ3 691 aaKnown RBP18.95■□□□□ 0.62
PLOD3-216ENST00000489927 TMEM39AQ9NV64 488 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 FAM184BQ9ULE4 1060 aa18.95■□□□□ 0.62
PLOD3-216ENST00000489927 APPP05067 770 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 ZFYP08048 801 aaPredicted RBP18.94■□□□□ 0.62
PLOD3-216ENST00000489927 GNAT2P19087 354 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 FAAP100Q0VG06 881 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 CCSAPQ6IQ19 270 aaPredicted RBP18.94■□□□□ 0.62
PLOD3-216ENST00000489927 ANKRD33Q7Z3H0 272 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 ZNF467Q7Z7K2 595 aaPredicted RBP18.94■□□□□ 0.62
PLOD3-216ENST00000489927 KLHDC9Q8NEP7 349 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 RNPC3Q96LT9 517 aaKnown RBP18.94■□□□□ 0.62
PLOD3-216ENST00000489927 SLC38A10Q9HBR0 1119 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 ZNF287Q9HBT7 754 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 STARD7Q9NQZ5 370 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 MTMR4Q9NYA4 1195 aa18.94■□□□□ 0.62
PLOD3-216ENST00000489927 CTDP1Q9Y5B0 961 aaPredicted RBP18.94■□□□□ 0.62
PLOD3-216ENST00000489927 MYADML2A6NDP7 307 aa18.93■□□□□ 0.62
PLOD3-216ENST00000489927 MOXD2PA6NHM9 499 aa18.93■□□□□ 0.62
PLOD3-216ENST00000489927 KCNA10Q16322 511 aa18.93■□□□□ 0.62
PLOD3-216ENST00000489927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.93■□□□□ 0.62
PLOD3-216ENST00000489927 IFNL3Q8IZI9 196 aa18.93■□□□□ 0.62
PLOD3-216ENST00000489927 LRRC47Q8N1G4 583 aaKnown RBP18.93■□□□□ 0.62
PLOD3-216ENST00000489927 ANKRD35Q8N283 1001 aa18.93■□□□□ 0.62
PLOD3-216ENST00000489927 NUP133Q8WUM0 1156 aa18.93■□□□□ 0.62
PLOD3-216ENST00000489927 TOX2Q96NM4 488 aa18.93■□□□□ 0.62
PLOD3-216ENST00000489927 FEM1BQ9UK73 627 aa18.93■□□□□ 0.62
PLOD3-216ENST00000489927 PATL2C9JE40 543 aaKnown RBP18.92■□□□□ 0.62
PLOD3-216ENST00000489927 ADCY6O43306 1168 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 DUSP11O75319 330 aaKnown RBP18.92■□□□□ 0.62
PLOD3-216ENST00000489927 TTLL1O95922 423 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 IRX5P78411 483 aaPredicted RBP18.92■□□□□ 0.62
PLOD3-216ENST00000489927 FPGSQ05932 587 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 ACVR2BQ13705 512 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 GMCL1P1Q8NEA9 526 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 MYLIPQ8WY64 445 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 FGD4Q96M96 766 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 SEC62Q99442 399 aaKnown RBP18.92■□□□□ 0.62
PLOD3-216ENST00000489927 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.92■□□□□ 0.62
PLOD3-216ENST00000489927 SYNPO2Q9UMS6 1093 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
PLOD3-216ENST00000489927 SPTBN5Q9NRC6 3674 aaKnown RBP18.92■□□□□ 0.62
PLOD3-216ENST00000489927 DCDC2CA8MYV0 355 aa18.91■□□□□ 0.62
PLOD3-216ENST00000489927 OAZ1P54368 228 aa18.91■□□□□ 0.62
PLOD3-216ENST00000489927 CHST13Q8NET6 341 aa18.91■□□□□ 0.62
PLOD3-216ENST00000489927 MAFAQ8NHW3 353 aaPredicted RBP18.91■□□□□ 0.62
PLOD3-216ENST00000489927 ABHD16BQ9H3Z7 469 aa18.91■□□□□ 0.62
PLOD3-216ENST00000489927 FBXO40Q9UH90 709 aa18.91■□□□□ 0.62
PLOD3-216ENST00000489927 MYH4Q9Y623 1939 aa18.9■□□□□ 0.62
PLOD3-216ENST00000489927 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
PLOD3-216ENST00000489927 TSPY3P0CV98 308 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms