RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 A0A1W2PQY0 241 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 GSG1L2A8MUP6 293 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 ATP2A1O14983 1001 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 CDK7P50613 346 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 RRP1P56182 461 aaKnown RBP9.8□□□□□ -0.84
SMG5-205ENST00000489907 FAM83BQ5T0W9 1011 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMG5-205ENST00000489907 C16orf59Q7L2K0 433 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 MYLIPQ8WY64 445 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 LENG1Q96BZ8 264 aaPredicted RBP9.8□□□□□ -0.84
SMG5-205ENST00000489907 TOX2Q96NM4 488 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 NUP88Q99567 741 aaPredicted RBP9.8□□□□□ -0.84
SMG5-205ENST00000489907 KATNBL1Q9H079 304 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 SH2D4AQ9H788 454 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 PRDM5Q9NQX1 630 aaPredicted RBP9.8□□□□□ -0.84
SMG5-205ENST00000489907 SLC4A4Q9Y6R1 1079 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 MUC3AQ02505 3323 aa9.8□□□□□ -0.84
SMG5-205ENST00000489907 MYADML2A6NDP7 307 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 F5H6K3 240 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 CTAGE5O15320 804 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 CLTBP09497 229 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 RARBP10826 455 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 AKR1A1P14550 325 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 ACLYP53396 1101 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 KLRC3Q07444 240 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 C20orf194Q5TEA3 1177 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 RNF180Q86T96 592 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 MSL3Q8N5Y2 521 aaKnown RBP9.79□□□□□ -0.84
SMG5-205ENST00000489907 OSBP2Q969R2 916 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 MKL1Q969V6 931 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 TSEN34Q9BSV6 310 aaKnown RBP9.79□□□□□ -0.84
SMG5-205ENST00000489907 NYAP2Q9P242 653 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 DDX19BQ9UMR2 479 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 SYNRGQ9UMZ2 1314 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 GBF1Q92538 1859 aa9.79□□□□□ -0.84
SMG5-205ENST00000489907 LCTP09848 1927 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 SMARCA5O60264 1052 aaPredicted RBP9.78□□□□□ -0.84
SMG5-205ENST00000489907 NDUFB10O96000 172 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 NKX3-2P78367 333 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 KCTD2Q14681 263 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 KCNA10Q16322 511 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 RASIP1Q5U651 963 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 GIMAP6Q6P9H5 292 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
SMG5-205ENST00000489907 MAFAQ8NHW3 353 aaPredicted RBP9.78□□□□□ -0.84
SMG5-205ENST00000489907 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMG5-205ENST00000489907 EPB41L4AQ9HCS5 686 aaPredicted RBP9.78□□□□□ -0.84
SMG5-205ENST00000489907 TBX21Q9UL17 535 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 SYNGAP1Q96PV0 1343 aa9.78□□□□□ -0.84
SMG5-205ENST00000489907 TMEM265A0A087WTH1 108 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 MOXD2PA6NHM9 499 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 DUSP11O75319 330 aaKnown RBP9.77□□□□□ -0.85
SMG5-205ENST00000489907 HMMRO75330 724 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 CST5P28325 142 aaPredicted RBP9.77□□□□□ -0.85
SMG5-205ENST00000489907 GRIN2CQ14957 1233 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 PRPF38AQ8NAV1 312 aaKnown RBP9.77□□□□□ -0.85
SMG5-205ENST00000489907 SLF1Q9BQI6 1058 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.77□□□□□ -0.854e-6■□□□□ 9.9
SMG5-205ENST00000489907 TEX13BQ9BXU2 312 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 UPF3AQ9H1J1 476 aaKnown RBP9.77□□□□□ -0.85
SMG5-205ENST00000489907 SLC38A10Q9HBR0 1119 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 ARPP21Q9UBL0 812 aaPredicted RBP9.77□□□□□ -0.85
SMG5-205ENST00000489907 FAM184BQ9ULE4 1060 aa9.77□□□□□ -0.85
SMG5-205ENST00000489907 LRRC37A2A6NM11 1700 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 CHD9Q3L8U1 2897 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 PQBP1O60828 265 aaKnown RBP9.76□□□□□ -0.85
SMG5-205ENST00000489907 TIMP1P01033 207 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 MS4A1P11836 297 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 RAG1P15918 1043 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 COPB2P35606 906 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 GJA9P57773 515 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 ACVR2BQ13705 512 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 TMEM240Q5SV17 173 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 SNRNP48Q6IEG0 339 aaKnown RBP9.76□□□□□ -0.85
SMG5-205ENST00000489907 KBTBD3Q8NAB2 608 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 USP38Q8NB14 1042 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 VWCEQ96DN2 955 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 LRRCC1Q9C099 1032 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 TMEM39AQ9NV64 488 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.76□□□□□ -0.85
SMG5-205ENST00000489907 MTMR4Q9NYA4 1195 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 CLIP2Q9UDT6 1046 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 ASTN1O14525 1302 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 ZNF536O15090 1300 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 ELP1O95163 1332 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 REV3LO60673 3130 aa9.76□□□□□ -0.85
SMG5-205ENST00000489907 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.75□□□□□ -0.85
SMG5-205ENST00000489907 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.75□□□□□ -0.85
SMG5-205ENST00000489907 CD4P01730 458 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 ASGR1P07306 291 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 FPGSQ05932 587 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 CCDC144BQ3MJ40 725 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 MFSD5Q6N075 450 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 ZSCAN25Q6NSZ9 544 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 FAM126BQ8IXS8 530 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 STK11IPQ8N1F8 1099 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 FAM133AQ8N9E0 248 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 SLC43A3Q8NBI5 491 aa9.75□□□□□ -0.85
SMG5-205ENST00000489907 APPBP2Q92624 585 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms