RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 FAM107AO95990 144 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 ABL1P00519 1130 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 IBSPP21815 317 aaPredicted RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 LSP1P33241 339 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 ABCD1P33897 745 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PEX19P40855 299 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 NDUFA8P51970 172 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 RIPK1Q13546 671 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 LAMB3Q13751 1172 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 LAPTM4AQ15012 233 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 CCDC38Q502W7 563 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 THEMIS2Q5TEJ8 643 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 KDM7AQ6ZMT4 941 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 SPATA21Q7Z572 469 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 KIRREL3Q8IZU9 778 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PHTF2Q8N3S3 785 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 C1orf131Q8NDD1 294 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 AENQ8WTP8 325 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 NSMCE1Q8WV22 266 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 CUL5Q93034 780 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 ACSBG1Q96GR2 724 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 MMTAG2Q9BU76 263 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 GGNBP2Q9H3C7 697 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 RABEP2Q9H5N1 569 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 C19orf44Q9H6X5 657 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 FAM184BQ9ULE4 1060 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 C15orf41Q9Y2V0 281 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PCDHGC5Q9Y5F6 944 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 RBM8AQ9Y5S9 174 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 SETD1AO15047 1707 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 SAMD9LQ8IVG5 1584 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PNMA6EA0A0J9YXQ4 647 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 B4DLN1 442 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 HIP1O00291 1037 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 CHL1O00533 1208 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 ACTN4O43707 911 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 DNAJC8O75937 253 aaPredicted RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 GLRX3O76003 335 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 GHRP10912 638 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 CMA1P23946 247 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 CD151P48509 253 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 APBA1Q02410 837 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 CKAP4Q07065 602 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 G3BP1Q13283 466 aaKnown RBP eCLIP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PDCLQ13371 301 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 MTMR3Q13615 1198 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 BLMHQ13867 455 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PTGISQ16647 500 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PPP4R3AQ6IN85 833 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 CCDC70Q6NSX1 233 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 MTHFD1LQ6UB35 978 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 CAPN12Q6ZSI9 719 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 NLRP14Q86W24 1093 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 EHBP1Q8NDI1 1231 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 FAM81AQ8TBF8 368 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 MYCBPAPQ8TBZ2 947 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 KCNG4Q8TDN1 519 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 SSH3Q8TE77 659 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 C14orf93Q9H972 538 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PRDM9Q9NQV7 894 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PAPOLBQ9NRJ5 636 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 INTS13Q9NVM9 706 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 LMCD1Q9NZU5 365 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 HMG20BQ9P0W2 317 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 RIPOR2Q9Y4F9 1068 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 SETBP1Q9Y6X0 1596 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 NEDD4P46934 1319 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 KDM6AO15550 1401 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ZFYVE9O95405 1425 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ADGRB1O14514 1584 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 CEMIPQ8WUJ3 1361 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 GOLGA6L10A6NI86 522 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 SPDYE3A6NKU9 549 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 PDLIM1O00151 329 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 DNM1LO00429 736 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 BUB1BO60566 1050 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 JAK2O60674 1132 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 HSF2BPO75031 334 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 SASH1O94885 1247 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 LUC7L3O95232 432 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 YEATS4O95619 227 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ATP6V1G2O95670 118 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 STK3Q13188 491 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 KRT32Q14532 448 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 NR1I3Q14994 352 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 SF3A1Q15459 793 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 CCDC57Q2TAC2 916 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ACCSLQ4AC99 568 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ANKRD20A8PQ5CZ79 823 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 SPECC1Q5M775 1068 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 SLC4A10Q6U841 1118 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 RAD9BQ6WBX8 426 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 TRAPPC11Q7Z392 1133 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 ARHGAP22Q7Z5H3 698 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 PPFIBP1Q86W92 1011 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 NPAS4Q8IUM7 802 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 TMTC1Q8IUR5 882 aa5.32□□□□□ -1.56
SNRNP40-206ENST00000489853 GALNT15Q8N3T1 639 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms