RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 DHX16O60231 1041 aaKnown RBP16.56■□□□□ 0.24
CLDN11-209ENST00000489485 PFKFB2O60825 505 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 CDC27P30260 824 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 HOXA7P31268 230 aaPredicted RBP16.56■□□□□ 0.24
CLDN11-209ENST00000489485 ADD1P35611 737 aaKnown RBP16.56■□□□□ 0.24
CLDN11-209ENST00000489485 OTUD7BQ6GQQ9 843 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 CCDC82Q8N4S0 544 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 CHURC1Q8WUH1 139 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 RBM28Q9NW13 759 aaKnown RBP16.56■□□□□ 0.24
CLDN11-209ENST00000489485 FEM1BQ9UK73 627 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 IGF2BP3O00425 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLDN11-209ENST00000489485 DTNBO60941 627 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 MAP2K2P36507 400 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 COG2Q14746 738 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 PPP2R5BQ15173 497 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 IFNL1Q8IU54 200 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 GTF3C6Q969F1 213 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 SLF1Q9BQI6 1058 aa16.56■□□□□ 0.24
CLDN11-209ENST00000489485 ASCC2Q9H1I8 757 aaPredicted RBP16.56■□□□□ 0.24
CLDN11-209ENST00000489485 CPLX1O14810 134 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 OSBPP22059 807 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 TM4SF4P48230 202 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 GNAQP50148 359 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 ST3GAL1Q11201 340 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 PRPF38AQ8NAV1 312 aaKnown RBP16.55■□□□□ 0.24
CLDN11-209ENST00000489485 VAT1LQ9HCJ6 419 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
CLDN11-209ENST00000489485 PNMA3Q9UL41 463 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 PARP14Q460N5 1801 aa16.55■□□□□ 0.24
CLDN11-209ENST00000489485 CYP2C8P10632 490 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 NBPF11Q86T75 865 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 REM2Q8IYK8 340 aaPredicted RBP16.54■□□□□ 0.24
CLDN11-209ENST00000489485 SMCR8Q8TEV9 937 aaPredicted RBP16.54■□□□□ 0.24
CLDN11-209ENST00000489485 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 PPFIA3O75145 1194 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 CUL4AQ13619 759 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 TMTC3Q6ZXV5 915 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 SRBD1Q8N5C6 995 aaKnown RBP16.54■□□□□ 0.24
CLDN11-209ENST00000489485 P2RX7Q99572 595 aaKnown RBP16.54■□□□□ 0.24
CLDN11-209ENST00000489485 LZTS2Q9BRK4 669 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 PPP1R9AQ9ULJ8 1098 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 PRR12Q9ULL5 1215 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 SLC45A1Q9Y2W3 748 aa16.54■□□□□ 0.24
CLDN11-209ENST00000489485 RLFQ13129 1914 aa16.53■□□□□ 0.24
CLDN11-209ENST00000489485 NID2Q14112 1375 aa16.53■□□□□ 0.24
CLDN11-209ENST00000489485 PLA2G6O60733 806 aa16.53■□□□□ 0.24
CLDN11-209ENST00000489485 SYDE2Q5VT97 1194 aa16.53■□□□□ 0.24
CLDN11-209ENST00000489485 CPLX2Q6PUV4 134 aaKnown RBP16.53■□□□□ 0.24
CLDN11-209ENST00000489485 BTNL9Q6UXG8 535 aa16.53■□□□□ 0.24
CLDN11-209ENST00000489485 ADGRF4Q8IZF3 695 aa16.53■□□□□ 0.24
CLDN11-209ENST00000489485 PIBF1Q8WXW3 757 aa16.53■□□□□ 0.24
CLDN11-209ENST00000489485 MYH6P13533 1939 aa16.53■□□□□ 0.24
CLDN11-209ENST00000489485 DSG3P32926 999 aa16.52■□□□□ 0.24
CLDN11-209ENST00000489485 TAF1CQ15572 869 aaPredicted RBP16.52■□□□□ 0.24
CLDN11-209ENST00000489485 HOMER1Q86YM7 354 aa16.52■□□□□ 0.24
CLDN11-209ENST00000489485 ATG4CQ96DT6 458 aa16.52■□□□□ 0.24
CLDN11-209ENST00000489485 PARK7Q99497 189 aaKnown RBP16.52■□□□□ 0.24
CLDN11-209ENST00000489485 CTDP1Q9Y5B0 961 aaPredicted RBP16.52■□□□□ 0.24
CLDN11-209ENST00000489485 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.23
CLDN11-209ENST00000489485 CYTH3O43739 400 aa16.52■□□□□ 0.23
CLDN11-209ENST00000489485 SNAP25P60880 206 aa16.52■□□□□ 0.23
CLDN11-209ENST00000489485 HERVK_113P62684 666 aa16.52■□□□□ 0.23
CLDN11-209ENST00000489485 PHKBQ93100 1093 aa16.52■□□□□ 0.23
CLDN11-209ENST00000489485 ZCCHC17Q9NP64 241 aaKnown RBP16.52■□□□□ 0.23
CLDN11-209ENST00000489485 COL11A1P12107 1806 aaPredicted RBP16.51■□□□□ 0.23
CLDN11-209ENST00000489485 ALDH1A1P00352 501 aa16.51■□□□□ 0.23
CLDN11-209ENST00000489485 NTRK3Q16288 839 aa16.51■□□□□ 0.23
CLDN11-209ENST00000489485 SPZ1Q9BXG8 430 aa16.51■□□□□ 0.23
CLDN11-209ENST00000489485 RIOX1Q9H6W3 641 aa16.51■□□□□ 0.23
CLDN11-209ENST00000489485 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
CLDN11-209ENST00000489485 MYPNQ86TC9 1320 aa16.51■□□□□ 0.23
CLDN11-209ENST00000489485 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 VWA5AO00534 786 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 SMARCA1P28370 1054 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 SLC35G1Q2M3R5 365 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 INTS4Q96HW7 963 aaKnown RBP16.5■□□□□ 0.23
CLDN11-209ENST00000489485 PAGR1Q9BTK6 254 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.5■□□□□ 0.23
CLDN11-209ENST00000489485 JAK2O60674 1132 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 ZBED4O75132 1171 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 CDKL5O76039 1030 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 IFNAR1P17181 557 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 CPXCR1Q8N123 301 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 RRP36Q96EU6 259 aaKnown RBP16.5■□□□□ 0.23
CLDN11-209ENST00000489485 PIGSQ96S52 555 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 SLC26A6Q9BXS9 759 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 ZFYVE28Q9HCC9 887 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 SEC63Q9UGP8 760 aaKnown RBP16.5■□□□□ 0.23
CLDN11-209ENST00000489485 V9GY48 417 aaPredicted RBP16.5■□□□□ 0.23
CLDN11-209ENST00000489485 CNTNAP5Q8WYK1 1306 aa16.5■□□□□ 0.23
CLDN11-209ENST00000489485 THSD7BQ9C0I4 1608 aa16.49■□□□□ 0.23
CLDN11-209ENST00000489485 AKAP17AQ02040 695 aaKnown RBP16.49■□□□□ 0.23
CLDN11-209ENST00000489485 FUT2Q10981 343 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms