RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 MYLIPQ8WY64 445 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 FGD4Q96M96 766 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 NYAP2Q9P242 653 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 ATP11BQ9Y2G3 1177 aa14.08□□□□□ -0.16
ACTN4-206ENST00000489451 DNAJC25-GNG10A0A024R161 153 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 TRIM43BA6NCK2 446 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 MINDY4BA8MYZ0 360 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 PRDM1O75626 825 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 FOSL2P15408 326 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 ITGB8P26012 769 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 ARRDC4Q8NCT1 418 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 FERMT2Q96AC1 680 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
ACTN4-206ENST00000489451 CEP95Q96GE4 821 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 DDRGK1Q96HY6 314 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 SNX27Q96L92 541 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 SLF1Q9BQI6 1058 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 TINF2Q9BSI4 451 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 PDLIM7Q9NR12 457 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 DIS3Q9Y2L1 958 aaKnown RBP14.07□□□□□ -0.16
ACTN4-206ENST00000489451 SYNGAP1Q96PV0 1343 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 SALL3Q9BXA9 1300 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 PLIN4Q96Q06 1357 aa14.07□□□□□ -0.16
ACTN4-206ENST00000489451 KBTBD13C9JR72 458 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 ADCY6O43306 1168 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 RAD21O60216 631 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 ADAMTS4O75173 837 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 SNAI1O95863 264 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-206ENST00000489451 PGK1P00558 417 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-206ENST00000489451 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
ACTN4-206ENST00000489451 C9orf50Q5SZB4 431 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 C1orf53Q5VUE5 145 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 IFNL3Q8IZI9 196 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 SLC5A4Q9NY91 659 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 NRBP1Q9UHY1 535 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 PHF24Q9UPV7 400 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 TACC3Q9Y6A5 838 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 CDH23Q9H251 3354 aa14.06□□□□□ -0.16
ACTN4-206ENST00000489451 LRRC37A2A6NM11 1700 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
ACTN4-206ENST00000489451 SHHQ15465 462 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 SNRNP48Q6IEG0 339 aaKnown RBP14.05□□□□□ -0.16
ACTN4-206ENST00000489451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.05□□□□□ -0.16
ACTN4-206ENST00000489451 LRRC47Q8N1G4 583 aaKnown RBP14.05□□□□□ -0.16
ACTN4-206ENST00000489451 BADQ92934 168 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 MKL1Q969V6 931 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 TEX13BQ9BXU2 312 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 XPNPEP3Q9NQH7 507 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 MTMR4Q9NYA4 1195 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 LCTP09848 1927 aa14.05□□□□□ -0.16
ACTN4-206ENST00000489451 MYADML2A6NDP7 307 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 PATL2C9JE40 543 aaKnown RBP14.04□□□□□ -0.16
ACTN4-206ENST00000489451 ATP2A1O14983 1001 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 ZFYP08048 801 aaPredicted RBP14.04□□□□□ -0.16
ACTN4-206ENST00000489451 TDO2P48775 406 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 TLE2Q04725 743 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 KCTD2Q14681 263 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 ZMYM1Q5SVZ6 1142 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 MAMDC4Q6UXC1 1216 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 RASGRP2Q7LDG7 609 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 LBHD1Q9BQE6 289 aaPredicted RBP14.04□□□□□ -0.16
ACTN4-206ENST00000489451 MKNK2Q9HBH9 465 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 SLC38A10Q9HBR0 1119 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 RAVER2Q9HCJ3 691 aaKnown RBP14.04□□□□□ -0.16
ACTN4-206ENST00000489451 HCN4Q9Y3Q4 1203 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 TTC41PQ6P2S7 1318 aa14.04□□□□□ -0.16
ACTN4-206ENST00000489451 A0A1W2PQ45 241 aaPredicted RBP14.03□□□□□ -0.16
ACTN4-206ENST00000489451 A0A1W2PQY0 241 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 RARBP10826 455 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 GNAT2P19087 354 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 COPB2P35606 906 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 EPHB4P54760 987 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 CCSAPQ6IQ19 270 aaPredicted RBP14.03□□□□□ -0.16
ACTN4-206ENST00000489451 PRPF38AQ8NAV1 312 aaKnown RBP14.03□□□□□ -0.16
ACTN4-206ENST00000489451 GMCL1P1Q8NEA9 526 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 KLHDC9Q8NEP7 349 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 NEDD1Q8NHV4 660 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 GPATCH3Q96I76 525 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 INCENPQ9NQS7 918 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 PRDM5Q9NQX1 630 aaPredicted RBP14.03□□□□□ -0.16
ACTN4-206ENST00000489451 SYNRGQ9UMZ2 1314 aa14.03□□□□□ -0.16
ACTN4-206ENST00000489451 ZNF536O15090 1300 aa14.02□□□□□ -0.17
ACTN4-206ENST00000489451 AKR1A1P14550 325 aa14.02□□□□□ -0.17
ACTN4-206ENST00000489451 CCDC129Q6ZRS4 1044 aa14.02□□□□□ -0.17
ACTN4-206ENST00000489451 CPXCR1Q8N123 301 aa14.02□□□□□ -0.17
ACTN4-206ENST00000489451 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
ACTN4-206ENST00000489451 KATNBL1Q9H079 304 aa14.02□□□□□ -0.17
ACTN4-206ENST00000489451 SEMA6BQ9H3T3 888 aa14.02□□□□□ -0.17
ACTN4-206ENST00000489451 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.02□□□□□ -0.17
ACTN4-206ENST00000489451 ASTN1O14525 1302 aa14.01□□□□□ -0.17
ACTN4-206ENST00000489451 TTLL1O95922 423 aa14.01□□□□□ -0.17
ACTN4-206ENST00000489451 APPP05067 770 aa14.01□□□□□ -0.17
ACTN4-206ENST00000489451 PPARAQ07869 468 aa14.01□□□□□ -0.17
ACTN4-206ENST00000489451 ZNF444Q8N0Y2 327 aaPredicted RBP14.01□□□□□ -0.17
ACTN4-206ENST00000489451 MSL3Q8N5Y2 521 aaKnown RBP14.01□□□□□ -0.17
ACTN4-206ENST00000489451 IL17RBQ9NRM6 502 aa14.01□□□□□ -0.17
ACTN4-206ENST00000489451 PRKAG2Q9UGJ0 569 aa14.01□□□□□ -0.17
ACTN4-206ENST00000489451 SYNPO2Q9UMS6 1093 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms