RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SPATA5Q8NB90 893 aa18.52■□□□□ 0.56
UFD1-209ENST00000489406 GDPD5Q8WTR4 605 aa18.52■□□□□ 0.56
UFD1-209ENST00000489406 LMCD1Q9NZU5 365 aa18.52■□□□□ 0.56
UFD1-209ENST00000489406 LRP2BPQ9P2M1 347 aa18.52■□□□□ 0.56
UFD1-209ENST00000489406 COL4A4P53420 1690 aaPredicted RBP18.51■□□□□ 0.55
UFD1-209ENST00000489406 ADCY6O43306 1168 aa18.51■□□□□ 0.55
UFD1-209ENST00000489406 SNAI1O95863 264 aaPredicted RBP18.51■□□□□ 0.55
UFD1-209ENST00000489406 DEFB128Q7Z7B8 93 aa18.51■□□□□ 0.55
UFD1-209ENST00000489406 TRPV6Q9H1D0 765 aa18.51■□□□□ 0.55
UFD1-209ENST00000489406 CABP5Q9NP86 173 aa18.51■□□□□ 0.55
UFD1-209ENST00000489406 FAM86C1Q9NVL1 165 aa18.51■□□□□ 0.55
UFD1-209ENST00000489406 PA2G4Q9UQ80 394 aaKnown RBP18.51■□□□□ 0.55
UFD1-209ENST00000489406 C5orf42Q9H799 3197 aa18.5■□□□□ 0.55
UFD1-209ENST00000489406 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
UFD1-209ENST00000489406 SLC25A27O95847 323 aa18.5■□□□□ 0.55
UFD1-209ENST00000489406 GJA9P57773 515 aa18.5■□□□□ 0.55
UFD1-209ENST00000489406 PPP4CP60510 307 aa18.5■□□□□ 0.55
UFD1-209ENST00000489406 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
UFD1-209ENST00000489406 TMEM132BQ14DG7 1078 aa18.5■□□□□ 0.55
UFD1-209ENST00000489406 SLC43A3Q8NBI5 491 aa18.5■□□□□ 0.55
UFD1-209ENST00000489406 SLC9A7Q96T83 725 aa18.5■□□□□ 0.55
UFD1-209ENST00000489406 A0A1W2PRG0 241 aa18.49■□□□□ 0.55
UFD1-209ENST00000489406 KIF28PB7ZC32 967 aa18.49■□□□□ 0.55
UFD1-209ENST00000489406 FLOT1O75955 427 aa18.49■□□□□ 0.55
UFD1-209ENST00000489406 GUCY1A2P33402 732 aa18.49■□□□□ 0.55
UFD1-209ENST00000489406 TCF15Q12870 199 aa18.49■□□□□ 0.55
UFD1-209ENST00000489406 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
UFD1-209ENST00000489406 HERC6Q8IVU3 1022 aa18.49■□□□□ 0.55
UFD1-209ENST00000489406 AGBL1Q96MI9 1066 aa18.49■□□□□ 0.55
UFD1-209ENST00000489406 UPF3AQ9H1J1 476 aaKnown RBP18.49■□□□□ 0.55
UFD1-209ENST00000489406 PTPRZ1P23471 2315 aaPredicted RBP18.49■□□□□ 0.55
UFD1-209ENST00000489406 TRIOO75962 3097 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 BEX3Q00994 111 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 SEPT2Q15019 361 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 KIAA1755Q5JYT7 1200 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 CXCL17Q6UXB2 119 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 ERMP1Q7Z2K6 904 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 ADGRA1Q86SQ6 560 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 PHOSPHO2Q8TCD6 241 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 SERPINB13Q9UIV8 391 aa18.48■□□□□ 0.55
UFD1-209ENST00000489406 H3BQ06 376 aaPredicted RBP18.47■□□□□ 0.55
UFD1-209ENST00000489406 CTAGE5O15320 804 aa18.47■□□□□ 0.55
UFD1-209ENST00000489406 B4GALT4O60513 344 aa18.47■□□□□ 0.55
UFD1-209ENST00000489406 PFKMP08237 780 aa18.47■□□□□ 0.55
UFD1-209ENST00000489406 ZP2Q05996 745 aa18.47■□□□□ 0.55
UFD1-209ENST00000489406 ITGA7Q13683 1181 aa18.47■□□□□ 0.55
UFD1-209ENST00000489406 PUS10Q3MIT2 529 aaKnown RBP18.47■□□□□ 0.55
UFD1-209ENST00000489406 NEUROD6Q96NK8 337 aa18.47■□□□□ 0.55
UFD1-209ENST00000489406 ACTN1P12814 892 aa18.46■□□□□ 0.55
UFD1-209ENST00000489406 ACVR2BQ13705 512 aa18.46■□□□□ 0.55
UFD1-209ENST00000489406 CCDC144BQ3MJ40 725 aa18.46■□□□□ 0.55
UFD1-209ENST00000489406 RIOX2Q8IUF8 465 aa18.46■□□□□ 0.55
UFD1-209ENST00000489406 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
UFD1-209ENST00000489406 MTUS1Q9ULD2 1270 aa18.46■□□□□ 0.55
UFD1-209ENST00000489406 FOCADQ5VW36 1801 aa18.46■□□□□ 0.55
UFD1-209ENST00000489406 GRIN2DO15399 1336 aa18.46■□□□□ 0.55
UFD1-209ENST00000489406 LCHNA4D1U4 455 aa18.45■□□□□ 0.54
UFD1-209ENST00000489406 DYNLL1P63167 89 aaKnown RBP18.45■□□□□ 0.54
UFD1-209ENST00000489406 PRRX2Q99811 253 aa18.45■□□□□ 0.54
UFD1-209ENST00000489406 UPF3BQ9BZI7 483 aaKnown RBP18.45■□□□□ 0.54
UFD1-209ENST00000489406 SUGCTQ9HAC7 445 aa18.45■□□□□ 0.54
UFD1-209ENST00000489406 CACNA1BQ00975 2339 aa18.45■□□□□ 0.54
UFD1-209ENST00000489406 C19orf67A6NJJ6 358 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 KRT37O76014 449 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 IRS1P35568 1242 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 TFCP2Q12800 502 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 MAMDC4Q6UXC1 1216 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 SPICE1Q8N0Z3 855 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 NEK9Q8TD19 979 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 MUTYHQ9UIF7 546 aa18.44■□□□□ 0.54
UFD1-209ENST00000489406 TECTAO75443 2155 aa18.43■□□□□ 0.54
UFD1-209ENST00000489406 SHMT1P34896 483 aa18.43■□□□□ 0.54
UFD1-209ENST00000489406 STAT3P40763 770 aa18.43■□□□□ 0.54
UFD1-209ENST00000489406 MCAMP43121 646 aa18.43■□□□□ 0.54
UFD1-209ENST00000489406 EHD4Q9H223 541 aa18.43■□□□□ 0.54
UFD1-209ENST00000489406 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.43■□□□□ 0.54
UFD1-209ENST00000489406 PRKAG3Q9UGI9 489 aa18.43■□□□□ 0.54
UFD1-209ENST00000489406 AKAP2Q9Y2D5 859 aa18.43■□□□□ 0.54
UFD1-209ENST00000489406 CACNA1GO43497 2377 aa18.43■□□□□ 0.54
UFD1-209ENST00000489406 MPHOSPH10O00566 681 aaKnown RBP18.42■□□□□ 0.54
UFD1-209ENST00000489406 CABYRO75952 493 aa18.42■□□□□ 0.54
UFD1-209ENST00000489406 PBXIP1Q96AQ6 731 aa18.42■□□□□ 0.54
UFD1-209ENST00000489406 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
UFD1-209ENST00000489406 SCN5AQ14524 2016 aa18.42■□□□□ 0.54
UFD1-209ENST00000489406 MYH1P12882 1939 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 CYP2C9P11712 490 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 ARID4AP29374 1257 aaPredicted RBP18.41■□□□□ 0.54
UFD1-209ENST00000489406 USP5P45974 858 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 PSMC6P62333 389 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 BMP8AQ7Z5Y6 402 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 ADHFE1Q8IWW8 467 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 ATOH1Q92858 354 aaPredicted RBP18.41■□□□□ 0.54
UFD1-209ENST00000489406 FTOQ9C0B1 505 aaKnown RBP eCLIP18.41■□□□□ 0.54
UFD1-209ENST00000489406 ABHD16BQ9H3Z7 469 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 COPRSQ9NQ92 184 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 SNRKQ9NRH2 765 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 FAM50BQ9Y247 325 aa18.41■□□□□ 0.54
UFD1-209ENST00000489406 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
UFD1-209ENST00000489406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms