RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PGK1P00558 417 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 CLTBP09497 229 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 GNAT2P19087 354 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 RASA1P20936 1047 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 TDO2P48775 406 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
SNX17-207ENST00000489402 TLE2Q04725 743 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 LRRFIP1Q32MZ4 808 aaKnown RBP11.19□□□□□ -0.62
SNX17-207ENST00000489402 SNRNP48Q6IEG0 339 aaKnown RBP11.19□□□□□ -0.62
SNX17-207ENST00000489402 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 MSL3Q8N5Y2 521 aaKnown RBP11.19□□□□□ -0.62
SNX17-207ENST00000489402 KBTBD3Q8NAB2 608 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 PRPF38AQ8NAV1 312 aaKnown RBP11.19□□□□□ -0.62
SNX17-207ENST00000489402 REPS2Q8NFH8 660 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 APPBP2Q92624 585 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 LENG1Q96BZ8 264 aaPredicted RBP11.19□□□□□ -0.62
SNX17-207ENST00000489402 GUCD1Q96NT3 240 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 STRBPQ96SI9 672 aaKnown RBP11.19□□□□□ -0.62
SNX17-207ENST00000489402 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 TACC3Q9Y6A5 838 aa11.19□□□□□ -0.62
SNX17-207ENST00000489402 SYNGAP1Q96PV0 1343 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 A0A1W2PQ45 241 aaPredicted RBP11.18□□□□□ -0.62
SNX17-207ENST00000489402 A0A1W2PQY0 241 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 TRIM43BA6NCK2 446 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 GSG1L2A8MUP6 293 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 F5H6K3 240 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 ZBED4O75132 1171 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 NDUFB10O96000 172 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 APPP05067 770 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 ZFYP08048 801 aaPredicted RBP11.18□□□□□ -0.62
SNX17-207ENST00000489402 ZNF865P0CJ78 1059 aaPredicted RBP11.18□□□□□ -0.62
SNX17-207ENST00000489402 RAG1P15918 1043 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 ITGB8P26012 769 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 KLRC3Q07444 240 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 C9orf50Q5SZB4 431 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 ZNF444Q8N0Y2 327 aaPredicted RBP11.18□□□□□ -0.62
SNX17-207ENST00000489402 CPXCR1Q8N123 301 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 TRIM43Q96BQ3 446 aaPredicted RBP11.18□□□□□ -0.62
SNX17-207ENST00000489402 CLIP2Q9UDT6 1046 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 FAM184BQ9ULE4 1060 aa11.18□□□□□ -0.62
SNX17-207ENST00000489402 DCDC2CA8MYV0 355 aa11.17□□□□□ -0.62
SNX17-207ENST00000489402 ATP2A1O14983 1001 aa11.17□□□□□ -0.62
SNX17-207ENST00000489402 RNF113AO15541 343 aaKnown RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 GPAA1O43292 621 aa11.17□□□□□ -0.62
SNX17-207ENST00000489402 PQBP1O60828 265 aaKnown RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 SMAD3P84022 425 aaKnown RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
SNX17-207ENST00000489402 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 OSBP2Q969R2 916 aa11.17□□□□□ -0.62
SNX17-207ENST00000489402 KIFC2Q96AC6 838 aa11.17□□□□□ -0.62
SNX17-207ENST00000489402 RNPC3Q96LT9 517 aaKnown RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 SEC62Q99442 399 aaKnown RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 TSEN34Q9BSV6 310 aaKnown RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 STARD7Q9NQZ5 370 aa11.17□□□□□ -0.62
SNX17-207ENST00000489402 FBXO40Q9UH90 709 aa11.17□□□□□ -0.62
SNX17-207ENST00000489402 ZHX1Q9UKY1 873 aaPredicted RBP11.17□□□□□ -0.62
SNX17-207ENST00000489402 RIPK3Q9Y572 518 aa11.17□□□□□ -0.62
SNX17-207ENST00000489402 SYNRGQ9UMZ2 1314 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 MOXD2PA6NHM9 499 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 M0R2C6 588 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 KIAA0355O15063 1070 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 ADAMTS4O75173 837 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 SLC3A2P08195 630 aaKnown RBP11.16□□□□□ -0.62
SNX17-207ENST00000489402 ACLYP53396 1101 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 FPGSQ05932 587 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 MAMDC4Q6UXC1 1216 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
SNX17-207ENST00000489402 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 CHMP4CQ96CF2 233 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
SNX17-207ENST00000489402 NACAP1Q9BZK3 213 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 SPC25Q9HBM1 224 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 TMEM39AQ9NV64 488 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 FEM1BQ9UK73 627 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 ISY1Q9ULR0 285 aaKnown RBP11.16□□□□□ -0.62
SNX17-207ENST00000489402 SYNPO2Q9UMS6 1093 aa11.16□□□□□ -0.62
SNX17-207ENST00000489402 REV3LO60673 3130 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 MROH7Q68CQ1 1323 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 DNAJC25-GNG10A0A024R161 153 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 IGKV6D-41A0A0C4DH26 115 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 RBAK-RBAKDNI3L0D1 243 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 ERC2O15083 957 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 ADCY6O43306 1168 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 PRDM1O75626 825 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 SNAI1O95863 264 aaPredicted RBP11.15□□□□□ -0.62
SNX17-207ENST00000489402 TTLL1O95922 423 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 TSPY3P0CV98 308 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 TSPY8P0CW00 308 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 PTGS1P23219 599 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 OAZ1P54368 228 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 EPHB4P54760 987 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 PDE4BQ07343 736 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 ANKRD33Q7Z3H0 272 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 PCSK9Q8NBP7 692 aaKnown RBP11.15□□□□□ -0.62
SNX17-207ENST00000489402 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 CEP95Q96GE4 821 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 GLT1D1Q96MS3 346 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms