RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CDC25BP30305 580 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 EPHX2P34913 555 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 GCGRP47871 477 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 HIRAP54198 1017 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-207ENST00000489357 MECOMQ03112 1051 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 CTDSPL2Q05D32 466 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 PDE4BQ07343 736 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 FSTL1Q12841 308 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 SNW1Q13573 536 aaKnown RBP9.74□□□□□ -0.85
VTI1A-207ENST00000489357 GNL2Q13823 731 aaKnown RBP9.74□□□□□ -0.85
VTI1A-207ENST00000489357 SARM1Q6SZW1 724 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-207ENST00000489357 CATIPQ7Z7H3 387 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 AMOTL1Q8IY63 956 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 ZNF654Q8IZM8 581 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 FMR1NBQ8N0W7 255 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-207ENST00000489357 FANCBQ8NB91 859 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 ZBED3Q96IU2 234 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-207ENST00000489357 ZSCAN10Q96SZ4 725 aaPredicted RBP9.74□□□□□ -0.85
VTI1A-207ENST00000489357 BPIFA3Q9BQP9 254 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 ZNF287Q9HBT7 754 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 ANO10Q9NW15 660 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 CNOT7Q9UIV1 285 aaKnown RBP9.74□□□□□ -0.85
VTI1A-207ENST00000489357 PCDHA7Q9UN72 937 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 CEP131Q9UPN4 1083 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 GJA3Q9Y6H8 435 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 SHTN1A0MZ66 631 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 PRKAB2O43741 272 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 MYO1BO43795 1136 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 CUTAO60888 179 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 ADCY5O95622 1261 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 MMP1P03956 469 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 PTMAP06454 111 aaKnown RBP9.73□□□□□ -0.85
VTI1A-207ENST00000489357 CFHP08603 1231 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 CDC27P30260 824 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 ZNF165P49910 485 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 PTPN5P54829 565 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 GTF2IP78347 998 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 USP50Q70EL3 339 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-207ENST00000489357 ADGRA1Q86SQ6 560 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 PNMA8AQ86V59 439 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-207ENST00000489357 NOSTRINQ8IVI9 506 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 CEP57L1Q8IYX8 460 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 CRACR2BQ8N4Y2 399 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-207ENST00000489357 FSIP1Q8NA03 581 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 MIGA1Q8NAN2 632 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 SMC1BQ8NDV3 1235 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 TBC1D22AQ8WUA7 517 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 MRIQ9BWK5 157 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 ADARB2Q9NS39 739 aaKnown RBP9.73□□□□□ -0.85
VTI1A-207ENST00000489357 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 HOOK1Q9UJC3 728 aaKnown RBP9.73□□□□□ -0.85
VTI1A-207ENST00000489357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.73□□□□□ -0.85
VTI1A-207ENST00000489357 SUGT1Q9Y2Z0 365 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 TNKSO95271 1327 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 MYO3BQ8WXR4 1341 aa9.73□□□□□ -0.85
VTI1A-207ENST00000489357 PRPF3O43395 683 aaKnown RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 RANBP6O60518 1105 aaKnown RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 ITGBL1O95965 494 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 LDHBP07195 334 aaKnown RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 KIF5BP33176 963 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 HTRA3P83110 453 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 AKAP17AQ02040 695 aaKnown RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 ZRSR1Q15695 479 aaKnown RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 ANO6Q4KMQ2 910 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 IFIT1BQ5T764 474 aaKnown RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 CTR9Q6PD62 1173 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 NBPF11Q86T75 865 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 DZIP1Q86YF9 867 aaKnown RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 MTMR14Q8NCE2 650 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 ANKS1AQ92625 1134 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 CCDC34Q96HJ3 373 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 MXD3Q9BW11 206 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 DCP1AQ9NPI6 582 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-207ENST00000489357 TOMM22Q9NS69 142 aa9.72□□□□□ -0.85
VTI1A-207ENST00000489357 TRPM7Q96QT4 1865 aa9.71□□□□□ -0.85
VTI1A-207ENST00000489357 GOLGA6L19H0YKK7 550 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 OFD1O75665 1012 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 EGFRP00533 1210 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 USP17L8P0C7I0 530 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 APLP1P51693 650 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 GUCY1B3Q02153 619 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 MMRN1Q13201 1228 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 PTPAQ15257 358 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 GRIK5Q16478 980 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 CAMK4Q16566 473 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 AXDND1Q5T1B0 1012 aaPredicted RBP9.71□□□□□ -0.86
VTI1A-207ENST00000489357 LDHDQ86WU2 507 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 DGKHQ86XP1 1220 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 ENAHQ8N8S7 591 aaPredicted RBP9.71□□□□□ -0.86
VTI1A-207ENST00000489357 ZNF384Q8TF68 577 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 SDR42E1Q8WUS8 393 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 SDF4Q9BRK5 362 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 PRR14Q9BWN1 585 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 SLC26A6Q9BXS9 759 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 CBX8Q9HC52 389 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 BRMS1Q9HCU9 246 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 TCP11L1Q9NUJ3 509 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms