RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CERKLQ49MI3 558 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-233ENST00000489352 IER5LQ5T953 404 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 EP400NLQ6ZTU2 488 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 ZNF384Q8TF68 577 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 GDPD5Q8WTR4 605 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 PBXIP1Q96AQ6 731 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 NOC4LQ9BVI4 516 aaKnown RBP14.18□□□□□ -0.14
HDAC6-233ENST00000489352 PRKAG3Q9UGI9 489 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
HDAC6-233ENST00000489352 FLT1P17948 1338 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 SCN5AQ14524 2016 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 LPXNO60711 386 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 FLOT1O75955 427 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 CIAO1O76071 339 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 MVPQ14764 893 aaKnown RBP14.17□□□□□ -0.14
HDAC6-233ENST00000489352 ZNF792Q3KQV3 632 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 TBC1D9Q6ZT07 1266 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 HERC6Q8IVU3 1022 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 ZBED2Q9BTP6 218 aa14.17□□□□□ -0.14
HDAC6-233ENST00000489352 CABYRO75952 493 aa14.16□□□□□ -0.14
HDAC6-233ENST00000489352 DSG3P32926 999 aa14.16□□□□□ -0.14
HDAC6-233ENST00000489352 IL15P40933 162 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-233ENST00000489352 TIMM10P62072 90 aa14.16□□□□□ -0.14
HDAC6-233ENST00000489352 TCF15Q12870 199 aa14.16□□□□□ -0.14
HDAC6-233ENST00000489352 GORABQ5T7V8 394 aa14.16□□□□□ -0.14
HDAC6-233ENST00000489352 MSL3Q8N5Y2 521 aaKnown RBP14.16□□□□□ -0.14
HDAC6-233ENST00000489352 SEZ6LQ9BYH1 1024 aa14.16□□□□□ -0.14
HDAC6-233ENST00000489352 FTOQ9C0B1 505 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC6-233ENST00000489352 WNT8AQ9H1J5 351 aa14.16□□□□□ -0.14
HDAC6-233ENST00000489352 RIF1Q5UIP0 2472 aaKnown RBP14.15□□□□□ -0.14
HDAC6-233ENST00000489352 H3BQ06 376 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-233ENST00000489352 RFX5P48382 616 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-233ENST00000489352 GJA9P57773 515 aa14.15□□□□□ -0.14
HDAC6-233ENST00000489352 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-233ENST00000489352 ITGA7Q13683 1181 aa14.15□□□□□ -0.14
HDAC6-233ENST00000489352 NAA16Q6N069 864 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-233ENST00000489352 NOL8Q76FK4 1167 aaKnown RBP14.15□□□□□ -0.14
HDAC6-233ENST00000489352 SPATA5Q8NB90 893 aa14.15□□□□□ -0.14
HDAC6-233ENST00000489352 DDX11Q96FC9 970 aa14.15□□□□□ -0.14
HDAC6-233ENST00000489352 TRPV6Q9H1D0 765 aa14.15□□□□□ -0.14
HDAC6-233ENST00000489352 MTUS1Q9ULD2 1270 aa14.15□□□□□ -0.14
HDAC6-233ENST00000489352 IL16Q14005 1332 aa14.15□□□□□ -0.15
HDAC6-233ENST00000489352 MCM3APO60318 1980 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 KRT37O76014 449 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 KCNJ6P48051 423 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 ZP2Q05996 745 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 EXOSC9Q06265 439 aaKnown RBP14.14□□□□□ -0.15
HDAC6-233ENST00000489352 ACVR2BQ13705 512 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 TATDN1Q6P1N9 297 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 CXCL17Q6UXB2 119 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 BMP8AQ7Z5Y6 402 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 ADHFE1Q8IWW8 467 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 WWC1Q8IX03 1113 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 ATG4CQ96DT6 458 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 CRBNQ96SW2 442 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 POP1Q99575 1024 aaKnown RBP14.14□□□□□ -0.15
HDAC6-233ENST00000489352 MUTYHQ9UIF7 546 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 SERPINB13Q9UIV8 391 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 AKAP2Q9Y2D5 859 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 FANCIQ9NVI1 1328 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 MYO15AQ9UKN7 3530 aa14.14□□□□□ -0.15
HDAC6-233ENST00000489352 TECTAO75443 2155 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 ZEB2O60315 1214 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 B4GALT4O60513 344 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 ARHGEF15O94989 841 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 SUPT20HL2P0C7V6 817 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 IRS1P35568 1242 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 TMEM132BQ14DG7 1078 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 CCDC144BQ3MJ40 725 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 EDAQ92838 391 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 XAGE2Q96GT9 111 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 NEUROD6Q96NK8 337 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 UPF3AQ9H1J1 476 aaKnown RBP14.13□□□□□ -0.15
HDAC6-233ENST00000489352 HMG20BQ9P0W2 317 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 CTNNA3Q9UI47 895 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 SIP14410 1827 aa14.13□□□□□ -0.15
HDAC6-233ENST00000489352 FAM186AA6NE01 2351 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 TMEM221A6NGB7 291 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 M0R296 226 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 MPHOSPH10O00566 681 aaKnown RBP14.12□□□□□ -0.15
HDAC6-233ENST00000489352 SNAI1O95863 264 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-233ENST00000489352 COPB2P35606 906 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 BEX3Q00994 111 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 HERC4Q5GLZ8 1057 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-233ENST00000489352 SLC43A3Q8NBI5 491 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 NEK9Q8TD19 979 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 AGBL1Q96MI9 1066 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 TGS1Q96RS0 853 aaKnown RBP14.12□□□□□ -0.15
HDAC6-233ENST00000489352 ABHD16BQ9H3Z7 469 aa14.12□□□□□ -0.15
HDAC6-233ENST00000489352 DCHS1Q96JQ0 3298 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 A0A1B0GUL7 405 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 RFC2P35250 354 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 STAT3P40763 770 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 USP5P45974 858 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 PPP4CP60510 307 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 SPRED2Q7Z698 418 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 TTC6Q86TZ1 520 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 RIOX2Q8IUF8 465 aa14.11□□□□□ -0.15
HDAC6-233ENST00000489352 KMT2EQ8IZD2 1858 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms