RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 PPP1R9AQ9ULJ8 1098 aa13.76□□□□□ -0.21
USP11-210ENST00000489030 RIPK3Q9Y572 518 aa13.76□□□□□ -0.21
USP11-210ENST00000489030 TACC3Q9Y6A5 838 aa13.76□□□□□ -0.21
USP11-210ENST00000489030 MYO9BQ13459 2157 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 SYNRGQ9UMZ2 1314 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 RAG1P15918 1043 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 PTGS1P23219 599 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 DNAJB2P25686 324 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 STAT3P40763 770 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 ACLYP53396 1101 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 FPGSQ05932 587 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
USP11-210ENST00000489030 C16orf86Q6ZW13 317 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 CHD1LQ86WJ1 897 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 FGD4Q96M96 766 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP11-210ENST00000489030 TMEM39AQ9NV64 488 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 SLC5A4Q9NY91 659 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 RAPGEFL1Q9UHV5 662 aa13.75□□□□□ -0.21
USP11-210ENST00000489030 ROBO3Q96MS0 1386 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 RAD21O60216 631 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
USP11-210ENST00000489030 SLC25A27O95847 323 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 KCNA10Q16322 511 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 CTR9Q6PD62 1173 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 TMED8Q6PL24 325 aaPredicted RBP13.74□□□□□ -0.21
USP11-210ENST00000489030 RNF180Q86T96 592 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 KLHDC9Q8NEP7 349 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP11-210ENST00000489030 NRBP1Q9UHY1 535 aa13.74□□□□□ -0.21
USP11-210ENST00000489030 IFIT2P09913 472 aaKnown RBP13.73□□□□□ -0.21
USP11-210ENST00000489030 AKR1A1P14550 325 aa13.73□□□□□ -0.21
USP11-210ENST00000489030 KCTD2Q14681 263 aa13.73□□□□□ -0.21
USP11-210ENST00000489030 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
USP11-210ENST00000489030 PAG1Q9NWQ8 432 aa13.73□□□□□ -0.21
USP11-210ENST00000489030 TBX21Q9UL17 535 aa13.73□□□□□ -0.21
USP11-210ENST00000489030 DIS3Q9Y2L1 958 aaKnown RBP13.73□□□□□ -0.21
USP11-210ENST00000489030 PLXNA1Q9UIW2 1896 aa13.73□□□□□ -0.21
USP11-210ENST00000489030 DNAJC25-GNG10A0A024R161 153 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 ACRP10323 421 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 SLC4A3P48751 1232 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 PPM1EQ8WY54 764 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 TIFAQ96CG3 184 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 CCDC17Q96LX7 622 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 LNPKQ9C0E8 428 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 PUS7LQ9H0K6 701 aaKnown RBP13.72□□□□□ -0.21
USP11-210ENST00000489030 ZNF576Q9H609 170 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 STARD7Q9NQZ5 370 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 ATP8A2Q9NTI2 1148 aa13.72□□□□□ -0.21
USP11-210ENST00000489030 ZHX1Q9UKY1 873 aaPredicted RBP13.72□□□□□ -0.21
USP11-210ENST00000489030 DDX49Q9Y6V7 483 aaKnown RBP13.72□□□□□ -0.21
USP11-210ENST00000489030 MYH8P13535 1937 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 TMEM265A0A087WTH1 108 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
USP11-210ENST00000489030 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
USP11-210ENST00000489030 CTAGE5O15320 804 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 NDUFB10O96000 172 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 TIMP1P01033 207 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 CSF2RAP15509 400 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 RASA1P20936 1047 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 ADGRE1Q14246 886 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 TMEM240Q5SV17 173 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 RASIP1Q5U651 963 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 SNRNP48Q6IEG0 339 aaKnown RBP13.71□□□□□ -0.21
USP11-210ENST00000489030 TOX2Q96NM4 488 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 PBX4Q9BYU1 374 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 PRDM12Q9H4Q4 367 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 CNPY2Q9Y2B0 182 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 SLC4A4Q9Y6R1 1079 aa13.71□□□□□ -0.21
USP11-210ENST00000489030 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 ATP5JP18859 108 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 CDK7P50613 346 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 GPATCH3Q96I76 525 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 HAUS7Q99871 368 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 SLF1Q9BQI6 1058 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
USP11-210ENST00000489030 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 RAVER2Q9HCJ3 691 aaKnown RBP13.7□□□□□ -0.22
USP11-210ENST00000489030 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
USP11-210ENST00000489030 FAM184BQ9ULE4 1060 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 MCM3APO60318 1980 aa13.7□□□□□ -0.22
USP11-210ENST00000489030 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
USP11-210ENST00000489030 UMODL1Q5DID0 1318 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.69□□□□□ -0.22
USP11-210ENST00000489030 DCDC2CA8MYV0 355 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 RBAK-RBAKDNI3L0D1 243 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 ASGR1P07306 291 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 TJAP1Q5JTD0 557 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 MFSD5Q6N075 450 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 MAMDC4Q6UXC1 1216 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 ZNF365Q70YC5 407 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 CPXCR1Q8N123 301 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 TEX13BQ9BXU2 312 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 KATNBL1Q9H079 304 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 GOPCQ9HD26 462 aa13.69□□□□□ -0.22
USP11-210ENST00000489030 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 295.3 ms