RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 PRR12Q9ULL5 1215 aa17.74■□□□□ 0.43
FDPS-213ENST00000489003 ZBED4O75132 1171 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 FCGRTP55899 365 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 TROAPQ12815 778 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 ARHGEF6Q15052 776 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 BLOC1S2Q6QNY1 142 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 OTOP1Q7RTM1 612 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 UBA5Q9GZZ9 404 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 SLC38A10Q9HBR0 1119 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 ZSWIM6Q9HCJ5 1215 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
FDPS-213ENST00000489003 PALM3A6NDB9 673 aaPredicted RBP17.72■□□□□ 0.43
FDPS-213ENST00000489003 PARP1P09874 1014 aaKnown RBP17.72■□□□□ 0.43
FDPS-213ENST00000489003 FDX1P10109 184 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 RPS6KB1P23443 525 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 STAT3P40763 770 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 CCNA1P78396 465 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 IKQ13123 557 aaPredicted RBP17.72■□□□□ 0.43
FDPS-213ENST00000489003 PLS1Q14651 629 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 GPATCH4Q5T3I0 446 aaKnown RBP17.72■□□□□ 0.43
FDPS-213ENST00000489003 CATIPQ7Z7H3 387 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 MOV10L1Q9BXT6 1211 aaKnown RBP17.72■□□□□ 0.43
FDPS-213ENST00000489003 TM6SF1Q9BZW5 370 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 CPVLQ9H3G5 476 aa17.72■□□□□ 0.43
FDPS-213ENST00000489003 ZNF214Q9UL59 606 aaPredicted RBP17.72■□□□□ 0.43
FDPS-213ENST00000489003 CCDC69A6NI79 296 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 GNRH1P01148 92 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
FDPS-213ENST00000489003 SNAP25P60880 206 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 GRM4Q14833 912 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 SYDE2Q5VT97 1194 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 Q6ZUG5 572 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 RUFY3Q7L099 469 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 SGMS1Q86VZ5 419 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 ZNF654Q8IZM8 581 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 CPXCR1Q8N123 301 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 A0A0G2JMZ2 1700 aa17.71■□□□□ 0.43
FDPS-213ENST00000489003 SMCHD1A6NHR9 2005 aa17.71■□□□□ 0.42
FDPS-213ENST00000489003 TNPO2O14787 897 aaKnown RBP17.7■□□□□ 0.42
FDPS-213ENST00000489003 HOXD10P28358 340 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 MAPK4P31152 587 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 ANAPC15P60006 121 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 RIOX2Q8IUF8 465 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
FDPS-213ENST00000489003 SHCBP1Q8NEM2 672 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 NUP133Q8WUM0 1156 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 MYL10Q9BUA6 226 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 RAVER2Q9HCJ3 691 aaKnown RBP17.7■□□□□ 0.42
FDPS-213ENST00000489003 SRRDQ9UH36 339 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 GABRQQ9UN88 632 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 RIPK3Q9Y572 518 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 CTDP1Q9Y5B0 961 aaPredicted RBP17.7■□□□□ 0.42
FDPS-213ENST00000489003 ZNF536O15090 1300 aa17.7■□□□□ 0.42
FDPS-213ENST00000489003 ZNFX1Q9P2E3 1918 aaKnown RBP17.69■□□□□ 0.42
FDPS-213ENST00000489003 ATP2A1O14983 1001 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 ERCC3P19447 782 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 GPR142Q7Z601 462 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 FBXL16Q8N461 479 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 COA7Q96BR5 231 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 MAP3K14Q99558 947 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 MCOLN1Q9GZU1 580 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 RANBP17Q9H2T7 1088 aaKnown RBP17.69■□□□□ 0.42
FDPS-213ENST00000489003 VAT1LQ9HCJ6 419 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 PTPN22Q9Y2R2 807 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 SLC12A7Q9Y666 1083 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
FDPS-213ENST00000489003 KLRF2D3W0D1 207 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 DDAH1O94760 285 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 SLC25A27O95847 323 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 SLC4A3P48751 1232 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 OAZ1P54368 228 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 PRMT2P55345 433 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 PKN2Q16513 984 aaKnown RBP17.68■□□□□ 0.42
FDPS-213ENST00000489003 SNRNP48Q6IEG0 339 aaKnown RBP17.68■□□□□ 0.42
FDPS-213ENST00000489003 CCDC174Q6PII3 467 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 NCAPG2Q86XI2 1143 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 AGBL1Q96MI9 1066 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 TEX13BQ9BXU2 312 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 AGXT2Q9BYV1 514 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 MROH8Q9H579 483 aa17.68■□□□□ 0.42
FDPS-213ENST00000489003 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
FDPS-213ENST00000489003 RXRAP19793 462 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 PTPREP23469 700 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 FGD1P98174 961 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 PRKCZQ05513 592 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 SLC35G1Q2M3R5 365 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 MORN1Q5T089 497 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 WDR78Q5VTH9 848 aa17.67■□□□□ 0.42
FDPS-213ENST00000489003 FBXO46Q6PJ61 603 aaPredicted RBP17.67■□□□□ 0.42
FDPS-213ENST00000489003 SYNE3Q6ZMZ3 975 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms