RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 PTPN14Q15678 1187 aa16.13■□□□□ 0.17
RPL13A-212ENST00000488946 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
RPL13A-212ENST00000488946 LONRF3Q496Y0 759 aa16.13■□□□□ 0.17
RPL13A-212ENST00000488946 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
RPL13A-212ENST00000488946 MYO3BQ8WXR4 1341 aa16.13■□□□□ 0.17
RPL13A-212ENST00000488946 PRR29P0C7W0 189 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 HHIPL2Q6UWX4 724 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 C2CD5Q86YS7 1000 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 FERMT2Q96AC1 680 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 TMX4Q9H1E5 349 aaPredicted RBP16.12■□□□□ 0.17
RPL13A-212ENST00000488946 TTF2Q9UNY4 1162 aaKnown RBP16.12■□□□□ 0.17
RPL13A-212ENST00000488946 BAZ2BQ9UIF8 2168 aaKnown RBP16.12■□□□□ 0.17
RPL13A-212ENST00000488946 WNT7AO00755 349 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
RPL13A-212ENST00000488946 NLRP5P59047 1200 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 FKBP1AP62942 108 aaKnown RBP16.12■□□□□ 0.17
RPL13A-212ENST00000488946 CCZ1BP86790 482 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 CCZ1P86791 482 aaPredicted RBP16.12■□□□□ 0.17
RPL13A-212ENST00000488946 TTC38Q5R3I4 469 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 DAGLBQ8NCG7 672 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 CNNM3Q8NE01 707 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 ZNF397Q8NF99 534 aaPredicted RBP16.12■□□□□ 0.17
RPL13A-212ENST00000488946 SPZ1Q9BXG8 430 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 ZNF215Q9UL58 517 aaPredicted RBP16.12■□□□□ 0.17
RPL13A-212ENST00000488946 SCN9AQ15858 1988 aa16.12■□□□□ 0.17
RPL13A-212ENST00000488946 H0YIN7 160 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 CYTH3O43739 400 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 DPEP1P16444 411 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 GTF2A1P52655 376 aaPredicted RBP16.11■□□□□ 0.17
RPL13A-212ENST00000488946 MDM2Q00987 491 aaPredicted RBP16.11■□□□□ 0.17
RPL13A-212ENST00000488946 DOK7Q18PE1 504 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
RPL13A-212ENST00000488946 PODNQ7Z5L7 613 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 CSRNP2Q9H175 543 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 SIPA1L1O43166 1804 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 M0R2N6 131 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
RPL13A-212ENST00000488946 ATP2B1P20020 1258 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
RPL13A-212ENST00000488946 PNOCQ13519 176 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 FBXW7Q969H0 707 aa16.11■□□□□ 0.17
RPL13A-212ENST00000488946 DDX4Q9NQI0 724 aaKnown RBP16.11■□□□□ 0.17
RPL13A-212ENST00000488946 BIN1O00499 593 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 ACTN4O43707 911 aaKnown RBP16.1■□□□□ 0.17
RPL13A-212ENST00000488946 SMARCA1P28370 1054 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 KMT5BQ4FZB7 885 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 SPECC1Q5M775 1068 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 GALNT17Q6IS24 598 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 MYCBPQ99417 103 aaPredicted RBP16.1■□□□□ 0.17
RPL13A-212ENST00000488946 RASSF4Q9H2L5 321 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 HOOK1Q9UJC3 728 aaKnown RBP16.1■□□□□ 0.17
RPL13A-212ENST00000488946 PCDHA4Q9UN74 947 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 IGKV6D-41A0A0C4DH26 115 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 IKBKBO14920 756 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 NCAPHQ15003 741 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 NT5DC1Q5TFE4 455 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 BLIDQ8IZY5 108 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 CCAR2Q8N163 923 aaKnown RBP16.1■□□□□ 0.17
RPL13A-212ENST00000488946 CCDC148Q8NFR7 591 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 MXD3Q9BW11 206 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 KCND1Q9NSA2 647 aa16.1■□□□□ 0.17
RPL13A-212ENST00000488946 F8W031 263 aaPredicted RBP16.09■□□□□ 0.17
RPL13A-212ENST00000488946 STXBP3O00186 592 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 ADAMTS3O15072 1205 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 CHRNA5P30532 468 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 WWC2Q6AWC2 1192 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 APOBEC3HQ6NTF7 200 aaKnown RBP16.09■□□□□ 0.17
RPL13A-212ENST00000488946 TYW1BQ6NUM6 668 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 GPKOWQ92917 476 aaPredicted RBP eCLIP16.09■□□□□ 0.17
RPL13A-212ENST00000488946 TEKT1Q969V4 418 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 NCAPGQ9BPX3 1015 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 MRIQ9BWK5 157 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 OSBPL5Q9H0X9 879 aaPredicted RBP16.09■□□□□ 0.17
RPL13A-212ENST00000488946 BARHL2Q9NY43 387 aa16.09■□□□□ 0.17
RPL13A-212ENST00000488946 BRCA1P38398 1863 aaKnown RBP16.09■□□□□ 0.17
RPL13A-212ENST00000488946 POLR2DO15514 142 aaKnown RBP16.08■□□□□ 0.17
RPL13A-212ENST00000488946 CDC42EP5Q6NZY7 148 aa16.08■□□□□ 0.17
RPL13A-212ENST00000488946 PIK3AP1Q6ZUJ8 805 aa16.08■□□□□ 0.17
RPL13A-212ENST00000488946 FOXP4Q8IVH2 680 aaPredicted RBP16.08■□□□□ 0.17
RPL13A-212ENST00000488946 TRMT1Q9NXH9 659 aaKnown RBP16.08■□□□□ 0.17
RPL13A-212ENST00000488946 SWAP70Q9UH65 585 aa16.08■□□□□ 0.17
RPL13A-212ENST00000488946 PSME4Q14997 1843 aa16.08■□□□□ 0.17
RPL13A-212ENST00000488946 DCAF8L1A6NGE4 600 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
RPL13A-212ENST00000488946 KCNA3P22001 575 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 PICALMQ13492 652 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 POSTNQ15063 836 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 KANK3Q6NY19 840 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 USP49Q70CQ1 688 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 ZDHHC15Q96MV8 337 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 PIM2Q9P1W9 311 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 SERTAD1Q9UHV2 236 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 PCDHA5Q9Y5H7 936 aa16.08■□□□□ 0.16
RPL13A-212ENST00000488946 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
RPL13A-212ENST00000488946 ZNF174Q15697 407 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms