RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PLEKHM2Q8IWE5 1019 aa14.16□□□□□ -0.14
CCHCR1-215ENST00000488920 TEX13BQ9BXU2 312 aa14.16□□□□□ -0.14
CCHCR1-215ENST00000488920 SENP6Q9GZR1 1112 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-215ENST00000488920 PRO3102Q9H379 93 aa14.16□□□□□ -0.14
CCHCR1-215ENST00000488920 RAVER2Q9HCJ3 691 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-215ENST00000488920 IL17RBQ9NRM6 502 aa14.16□□□□□ -0.14
CCHCR1-215ENST00000488920 ANAPC4Q9UJX5 808 aa14.16□□□□□ -0.14
CCHCR1-215ENST00000488920 SYNPO2Q9UMS6 1093 aa14.16□□□□□ -0.14
CCHCR1-215ENST00000488920 PLIN4Q96Q06 1357 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 HSPD1P10809 573 aaKnown RBP14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 BMP3P12645 472 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 SYN1P17600 705 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 MCCP23508 829 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 COPB2P35606 906 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 LRRC26Q2I0M4 334 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 ZNF792Q3KQV3 632 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 ZNF589Q86UQ0 364 aaPredicted RBP14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 SLC38A10Q9HBR0 1119 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 TOMM22Q9NS69 142 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 STX8Q9UNK0 236 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
CCHCR1-215ENST00000488920 TMEM232C9JQI7 657 aa14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 SEPT4O43236 478 aa14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 SDSP20132 328 aa14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 GJC2Q5T442 439 aaPredicted RBP14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 TICAM2Q86XR7 235 aa14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 DDX11Q96FC9 970 aa14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 TINF2Q9BSI4 451 aa14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 PCDH10Q9P2E7 1040 aa14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 MTMR7Q9Y216 660 aa14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 DIS3Q9Y2L1 958 aaKnown RBP14.14□□□□□ -0.15
CCHCR1-215ENST00000488920 GREB1LQ9C091 1923 aaPredicted RBP14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 DNM1LO00429 736 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 ORC4O43929 436 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 TAL1P17542 331 aaPredicted RBP14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 SLC1A4P43007 532 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 HAND2P61296 217 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 IKQ13123 557 aaPredicted RBP14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 PPP4R3BQ5MIZ7 849 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 ARRDC4Q8NCT1 418 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 CHURC1Q8WUH1 139 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 STAG1Q8WVM7 1258 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 GMCL1Q96IK5 515 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 OSBPL3Q9H4L5 887 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 RANBP2P49792 3224 aaKnown RBP14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 CCDC171Q6TFL3 1326 aa14.13□□□□□ -0.15
CCHCR1-215ENST00000488920 FGRP09769 529 aa14.12□□□□□ -0.15
CCHCR1-215ENST00000488920 STAT2P52630 851 aa14.12□□□□□ -0.15
CCHCR1-215ENST00000488920 SNAP25P60880 206 aa14.12□□□□□ -0.15
CCHCR1-215ENST00000488920 RCSD1Q6JBY9 416 aa14.12□□□□□ -0.15
CCHCR1-215ENST00000488920 KCTD1Q719H9 257 aa14.12□□□□□ -0.15
CCHCR1-215ENST00000488920 RASGRP2Q7LDG7 609 aa14.12□□□□□ -0.15
CCHCR1-215ENST00000488920 HOMER2Q9NSB8 354 aa14.12□□□□□ -0.15
CCHCR1-215ENST00000488920 DNAJC25-GNG10A0A024R161 153 aa14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 MAGEA10P43363 369 aaPredicted RBP14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 OAZ1P54368 228 aa14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 IRX6P78412 446 aaPredicted RBP14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 FAM160B2Q86V87 743 aa14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 ANKRD35Q8N283 1001 aa14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 AGBL1Q96MI9 1066 aa14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 GDF15Q99988 308 aa14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 NRBP1Q9UHY1 535 aa14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 ZNF236Q9UL36 1845 aa14.11□□□□□ -0.15
CCHCR1-215ENST00000488920 KBTBD13C9JR72 458 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 ZNF865P0CJ78 1059 aaPredicted RBP14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 FDX1P10109 184 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 NOVP48745 357 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 MFAP1P55081 439 aaKnown RBP14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 LRRC41Q15345 812 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 CCDC174Q6PII3 467 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 CHST13Q8NET6 341 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 DIAPH3Q9NSV4 1193 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 FBXO40Q9UH90 709 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 CNPY2Q9Y2B0 182 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 TRIOBPQ9H2D6 2365 aa14.1□□□□□ -0.15
CCHCR1-215ENST00000488920 PLA2G6O60733 806 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 SNAI1O95863 264 aaPredicted RBP14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 PGK1P00558 417 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 RARBP10826 455 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 BMP8BP34820 402 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 ADCYAP1R1P41586 468 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 CCDC96Q2M329 555 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 AKNAD1Q5T1N1 836 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 TTBK2Q6IQ55 1244 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 MFSD6Q6ZSS7 791 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 TBC1D10CQ8IV04 446 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 LENG1Q96BZ8 264 aaPredicted RBP14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 TMEM47Q9BQJ4 181 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 XPNPEP3Q9NQH7 507 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 TCP11L1Q9NUJ3 509 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 PRR12Q9ULL5 1215 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 ZNF536O15090 1300 aa14.09□□□□□ -0.15
CCHCR1-215ENST00000488920 PARP14Q460N5 1801 aa14.08□□□□□ -0.15
CCHCR1-215ENST00000488920 DNAH12Q6ZR08 3092 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms