RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CHP1Q99653 195 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 HINFPQ9BQA5 517 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 NOL10Q9BSC4 688 aaKnown RBP14.34□□□□□ -0.11
CLIC4-202ENST00000488683 TUBB4AP04350 444 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 PBX1P40424 430 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 SBK1Q52WX2 424 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 ZNF569Q5MCW4 686 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 GJA10Q969M2 543 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 MKRN1Q9UHC7 482 aaKnown RBP14.34□□□□□ -0.11
CLIC4-202ENST00000488683 PDS5AQ29RF7 1337 aaKnown RBP14.34□□□□□ -0.11
CLIC4-202ENST00000488683 BMP15O95972 392 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 PNMA6AP0CW24 399 aaPredicted RBP14.33□□□□□ -0.12
CLIC4-202ENST00000488683 PLA2G4AP47712 749 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 BLIDQ8IZY5 108 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 SLF1Q9BQI6 1058 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 STAT6P42226 847 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.12
CLIC4-202ENST00000488683 SUGCTQ9HAC7 445 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 FAM53CQ9NYF3 392 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 ADGRG1Q9Y653 693 aa14.33□□□□□ -0.12
CLIC4-202ENST00000488683 TSPY3P0CV98 308 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 TSPY8P0CW00 308 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 NAALADL2Q58DX5 795 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 ANKRD2Q9GZV1 360 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 F8W031 263 aaPredicted RBP14.32□□□□□ -0.12
CLIC4-202ENST00000488683 MFAP3LO75121 409 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 RPS6KA4O75676 772 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 RPN1P04843 607 aaKnown RBP14.32□□□□□ -0.12
CLIC4-202ENST00000488683 C12orf60Q5U649 245 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 IQUBQ8NA54 791 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 NGLY1Q96IV0 654 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 PCDHA6Q9UN73 950 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 PCDHA8Q9Y5H6 950 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 MRFAP1Q9Y605 127 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 BTAF1O14981 1849 aa14.32□□□□□ -0.12
CLIC4-202ENST00000488683 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
CLIC4-202ENST00000488683 MAP3K9P80192 1104 aa14.31□□□□□ -0.12
CLIC4-202ENST00000488683 TMEM260Q9NX78 707 aa14.31□□□□□ -0.12
CLIC4-202ENST00000488683 CCNL1Q9UK58 526 aaPredicted RBP14.31□□□□□ -0.12
CLIC4-202ENST00000488683 FRMPD2Q68DX3 1309 aaPredicted RBP14.31□□□□□ -0.12
CLIC4-202ENST00000488683 KCNJ18B7U540 433 aa14.31□□□□□ -0.12
CLIC4-202ENST00000488683 ENC1O14682 589 aa14.31□□□□□ -0.12
CLIC4-202ENST00000488683 UBXN1Q04323 297 aa14.31□□□□□ -0.12
CLIC4-202ENST00000488683 KCNJ12Q14500 433 aa14.31□□□□□ -0.12
CLIC4-202ENST00000488683 LETM2Q2VYF4 491 aa14.31□□□□□ -0.12
CLIC4-202ENST00000488683 UTP14CQ5TAP6 766 aaKnown RBP14.31□□□□□ -0.12
CLIC4-202ENST00000488683 SLC35F6Q8N357 371 aa14.31□□□□□ -0.12
CLIC4-202ENST00000488683 CCDC175P0C221 793 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 TRAPPC10P48553 1259 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 COPB1P53618 953 aaKnown RBP14.3□□□□□ -0.12
CLIC4-202ENST00000488683 PAK1Q13153 545 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 TPTE2Q6XPS3 522 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 IRF2BP1Q8IU81 584 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 TMEM47Q9BQJ4 181 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 PARD6BQ9BYG5 372 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 CCDC194A0A1B0GVG4 234 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 M0R2N6 131 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 RHOXF2BP0C7M4 288 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 FCER1AP12319 257 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 TERF2Q15554 542 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 PANX2Q96RD6 677 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 RHOXF2Q9BQY4 288 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 MXD3Q9BW11 206 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 HDAC6Q9UBN7 1215 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 CDK5RAP2Q96SN8 1893 aa14.3□□□□□ -0.12
CLIC4-202ENST00000488683 PICALMQ13492 652 aa14.29□□□□□ -0.12
CLIC4-202ENST00000488683 CT47A1Q5JQC4 288 aaPredicted RBP14.29□□□□□ -0.12
CLIC4-202ENST00000488683 JAKMIP3Q5VZ66 844 aa14.29□□□□□ -0.12
CLIC4-202ENST00000488683 TMCO3Q6UWJ1 677 aa14.29□□□□□ -0.12
CLIC4-202ENST00000488683 GTPBP4Q9BZE4 634 aaKnown RBP14.29□□□□□ -0.12
CLIC4-202ENST00000488683 BIN2Q9UBW5 565 aaPredicted RBP14.29□□□□□ -0.12
CLIC4-202ENST00000488683 PCDHA4Q9UN74 947 aa14.29□□□□□ -0.12
CLIC4-202ENST00000488683 NAV1Q8NEY1 1877 aa14.29□□□□□ -0.12
CLIC4-202ENST00000488683 GTPBP6O43824 516 aaPredicted RBP14.29□□□□□ -0.12
CLIC4-202ENST00000488683 KIF5BP33176 963 aa14.29□□□□□ -0.12
CLIC4-202ENST00000488683 KRT9P35527 623 aa14.29□□□□□ -0.12
CLIC4-202ENST00000488683 TCP11X2Q5H9J9 407 aa14.29□□□□□ -0.12
CLIC4-202ENST00000488683 CCNT1O60563 726 aaKnown RBP14.28□□□□□ -0.12
CLIC4-202ENST00000488683 TECP42680 631 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 GRM4Q14833 912 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 NCAPH2Q6IBW4 605 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 DGKHQ86XP1 1220 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
CLIC4-202ENST00000488683 SRRTQ9BXP5 876 aaKnown RBP14.28□□□□□ -0.12
CLIC4-202ENST00000488683 ABHD10Q9NUJ1 306 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 GUCA1BQ9UMX6 200 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 B4DLN1 442 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 KLRF2D3W0D1 207 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 SRGAP2O75044 1071 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 BTDP43251 543 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 GPSM2P81274 684 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 KIF4BQ2VIQ3 1234 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 CCDC178Q5BJE1 867 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
CLIC4-202ENST00000488683 DTHD1Q6ZMT9 781 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms