RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RANGAP1P46060 587 aaPredicted RBP5.33□□□□□ -1.56
CD46-215ENST00000488596 FANCCQ00597 558 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 SLC14A2Q15849 920 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 NBPF9Q3BBW0 867 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 ARSHQ5FYA8 562 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 PLCD4Q9BRC7 762 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 CNTD2Q9H8S5 307 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 EPB41L4AQ9HCS5 686 aaPredicted RBP5.33□□□□□ -1.56
CD46-215ENST00000488596 CRTAC1Q9NQ79 661 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 SIRT5Q9NXA8 310 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 MINPP1Q9UNW1 487 aa5.33□□□□□ -1.56
CD46-215ENST00000488596 HRKO00198 91 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 RFXAPO00287 272 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 FKTNO75072 461 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 ZNF76P36508 570 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 PCBP3P57721 371 aaKnown RBP5.32□□□□□ -1.56
CD46-215ENST00000488596 CHMP4BP1P59074 171 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 BBS9Q3SYG4 887 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 NBPF12Q5TAG4 269 aaPredicted RBP5.32□□□□□ -1.56
CD46-215ENST00000488596 FAM196AQ6ZSG2 479 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 ZNF655Q8N720 491 aaPredicted RBP5.32□□□□□ -1.56
CD46-215ENST00000488596 LINC00116Q8NCU8 138 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 RNF34Q969K3 372 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 DACT3Q96B18 629 aaPredicted RBP5.32□□□□□ -1.56
CD46-215ENST00000488596 SIGLEC10Q96LC7 697 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 XYLT2Q9H1B5 865 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 IRAK3Q9Y616 596 aa5.32□□□□□ -1.56
CD46-215ENST00000488596 SSU72P8A0A1W2PR75 194 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 N4BP3O15049 544 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 PRAMEF1O95521 474 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 SYPP08247 313 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 RAG1P15918 1043 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 POLR2BP30876 1174 aaKnown RBP5.31□□□□□ -1.56
CD46-215ENST00000488596 YBX1P67809 324 aaKnown RBP5.31□□□□□ -1.56
CD46-215ENST00000488596 PWP1Q13610 501 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 NFIXQ14938 502 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 VMACQ2NL98 169 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 FBXL19Q6PCT2 694 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 METTL16Q86W50 562 aaKnown RBP5.31□□□□□ -1.56
CD46-215ENST00000488596 TMEM151BQ8IW70 566 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 BRMS1Q9HCU9 246 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 COPRSQ9NQ92 184 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 GGT7Q9UJ14 662 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 PCDHB14Q9Y5E9 798 aa5.31□□□□□ -1.56
CD46-215ENST00000488596 OTOL1A6NHN0 477 aaPredicted RBP5.3□□□□□ -1.56
CD46-215ENST00000488596 PNLIPP16233 465 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 AFF3P51826 1226 aaKnown RBP5.3□□□□□ -1.56
CD46-215ENST00000488596 RTP1P59025 263 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 RNF4P78317 190 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 NT5DC4Q86YG4 428 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 TMEFF1Q8IYR6 380 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 CXorf38Q8TB03 319 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 ZNF512BQ96KM6 892 aaPredicted RBP5.3□□□□□ -1.56
CD46-215ENST00000488596 PRDM14Q9GZV8 571 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.3□□□□□ -1.56
CD46-215ENST00000488596 KBTBD4Q9NVX7 518 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 RTEL1Q9NZ71 1219 aa5.3□□□□□ -1.56
CD46-215ENST00000488596 FADS2P1A8MWK0 482 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 IRS4O14654 1257 aaPredicted RBP5.29□□□□□ -1.56
CD46-215ENST00000488596 SIGLEC6O43699 453 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 ATE1O95260 518 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 CDR1P51861 262 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 ERVFRD-1P60508 538 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 CWF19L2Q2TBE0 894 aaKnown RBP5.29□□□□□ -1.56
CD46-215ENST00000488596 ZNF394Q53GI3 561 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 CDCP2Q5VXM1 449 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 OVOS1Q6IE37 1185 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 FEZF2Q8TBJ5 459 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 KCNQ5Q9NR82 932 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 METTL5Q9NRN9 209 aaKnown RBP5.29□□□□□ -1.56
CD46-215ENST00000488596 GMIPQ9P107 970 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 KLHL14Q9P2G3 628 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 PCDHGB7Q9Y5F8 929 aa5.29□□□□□ -1.56
CD46-215ENST00000488596 GREM1O60565 184 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 ERCC5P28715 1186 aaPredicted RBP5.28□□□□□ -1.56
CD46-215ENST00000488596 CEBPAP49715 358 aaPredicted RBP5.28□□□□□ -1.56
CD46-215ENST00000488596 KRTAP10-2P60368 255 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 RACK1P63244 317 aaKnown RBP5.28□□□□□ -1.56
CD46-215ENST00000488596 RAD51AP2Q09MP3 1159 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 MLECQ14165 292 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 HSF5Q4G112 596 aaPredicted RBP5.28□□□□□ -1.56
CD46-215ENST00000488596 HS2ST1Q7LGA3 356 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 ERMP1Q7Z2K6 904 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 MZB1Q8WU39 189 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 ATG4CQ96DT6 458 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 LRRC3Q9BY71 257 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 CNNM2Q9H8M5 875 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 TNFRSF10DQ9UBN6 386 aa5.28□□□□□ -1.56
CD46-215ENST00000488596 SASH1O94885 1247 aa5.27□□□□□ -1.57
CD46-215ENST00000488596 EIF4A3P38919 411 aaKnown RBP5.27□□□□□ -1.57
CD46-215ENST00000488596 CRKP46108 304 aa5.27□□□□□ -1.57
CD46-215ENST00000488596 SKOR2Q2VWA4 1001 aaPredicted RBP5.27□□□□□ -1.57
CD46-215ENST00000488596 PRRT2Q7Z6L0 340 aaPredicted RBP5.27□□□□□ -1.57
CD46-215ENST00000488596 GGNQ86UU5 652 aa5.27□□□□□ -1.57
CD46-215ENST00000488596 USP48Q86UV5 1035 aa5.27□□□□□ -1.57
CD46-215ENST00000488596 LDHDQ86WU2 507 aa5.27□□□□□ -1.57
CD46-215ENST00000488596 FAM129CQ86XR2 697 aa5.27□□□□□ -1.57
CD46-215ENST00000488596 IGDCC3Q8IVU1 814 aa5.27□□□□□ -1.57
CD46-215ENST00000488596 TMEM192Q8IY95 271 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms