RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SNRNP48Q6IEG0 339 aaKnown RBP22.82■■□□□ 1.24
GGPS1-206ENST00000488594 MAMDC4Q6UXC1 1216 aa22.82■■□□□ 1.24
GGPS1-206ENST00000488594 PRPF38AQ8NAV1 312 aaKnown RBP22.82■■□□□ 1.24
GGPS1-206ENST00000488594 STRBPQ96SI9 672 aaKnown RBP22.82■■□□□ 1.24
GGPS1-206ENST00000488594 MKNK2Q9HBH9 465 aa22.82■■□□□ 1.24
GGPS1-206ENST00000488594 STARD7Q9NQZ5 370 aa22.82■■□□□ 1.24
GGPS1-206ENST00000488594 TMEM39AQ9NV64 488 aa22.82■■□□□ 1.24
GGPS1-206ENST00000488594 DCDC2CA8MYV0 355 aa22.81■■□□□ 1.24
GGPS1-206ENST00000488594 F5H6K3 240 aa22.81■■□□□ 1.24
GGPS1-206ENST00000488594 ATP2A1O14983 1001 aa22.81■■□□□ 1.24
GGPS1-206ENST00000488594 ACLYP53396 1101 aa22.81■■□□□ 1.24
GGPS1-206ENST00000488594 KLRC3Q07444 240 aa22.81■■□□□ 1.24
GGPS1-206ENST00000488594 ZNF467Q7Z7K2 595 aaPredicted RBP22.81■■□□□ 1.24
GGPS1-206ENST00000488594 ZNFX1Q9P2E3 1918 aaKnown RBP22.8■■□□□ 1.24
GGPS1-206ENST00000488594 COL11A1P12107 1806 aaPredicted RBP22.8■■□□□ 1.24
GGPS1-206ENST00000488594 DNAJC25-GNG10A0A024R161 153 aa22.8■■□□□ 1.24
GGPS1-206ENST00000488594 RASA1P20936 1047 aa22.8■■□□□ 1.24
GGPS1-206ENST00000488594 MYLIPQ8WY64 445 aa22.8■■□□□ 1.24
GGPS1-206ENST00000488594 LENG1Q96BZ8 264 aaPredicted RBP22.8■■□□□ 1.24
GGPS1-206ENST00000488594 NUP88Q99567 741 aaPredicted RBP22.8■■□□□ 1.24
GGPS1-206ENST00000488594 SYNRGQ9UMZ2 1314 aa22.8■■□□□ 1.24
GGPS1-206ENST00000488594 SNAI1O95863 264 aaPredicted RBP22.79■■□□□ 1.24
GGPS1-206ENST00000488594 NDUFB10O96000 172 aa22.79■■□□□ 1.24
GGPS1-206ENST00000488594 FOSL2P15408 326 aa22.79■■□□□ 1.24
GGPS1-206ENST00000488594 EPHB4P54760 987 aa22.79■■□□□ 1.24
GGPS1-206ENST00000488594 FAAP100Q0VG06 881 aa22.79■■□□□ 1.24
GGPS1-206ENST00000488594 MIER1Q8N108 512 aa22.79■■□□□ 1.24
GGPS1-206ENST00000488594 KLHDC9Q8NEP7 349 aa22.79■■□□□ 1.24
GGPS1-206ENST00000488594 ZNF287Q9HBT7 754 aa22.79■■□□□ 1.24
GGPS1-206ENST00000488594 SYNPO2Q9UMS6 1093 aa22.79■■□□□ 1.24
GGPS1-206ENST00000488594 ZBED4O75132 1171 aa22.78■■□□□ 1.24
GGPS1-206ENST00000488594 DUSP11O75319 330 aaKnown RBP22.78■■□□□ 1.24
GGPS1-206ENST00000488594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.78■■□□□ 1.24
GGPS1-206ENST00000488594 ECHDC1Q9NTX5 307 aa22.78■■□□□ 1.24
GGPS1-206ENST00000488594 ZHX1Q9UKY1 873 aaPredicted RBP22.78■■□□□ 1.24
GGPS1-206ENST00000488594 RIPK3Q9Y572 518 aa22.78■■□□□ 1.24
GGPS1-206ENST00000488594 CTDP1Q9Y5B0 961 aaPredicted RBP22.78■■□□□ 1.24
GGPS1-206ENST00000488594 SMCHD1A6NHR9 2005 aa22.78■■□□□ 1.24
GGPS1-206ENST00000488594 MROH7Q68CQ1 1323 aa22.78■■□□□ 1.24
GGPS1-206ENST00000488594 PLXNA1Q9UIW2 1896 aa22.78■■□□□ 1.24
GGPS1-206ENST00000488594 GSG1L2A8MUP6 293 aa22.77■■□□□ 1.24
GGPS1-206ENST00000488594 CST5P28325 142 aaPredicted RBP22.77■■□□□ 1.24
GGPS1-206ENST00000488594 KCNA10Q16322 511 aa22.77■■□□□ 1.24
GGPS1-206ENST00000488594 CCSAPQ6IQ19 270 aaPredicted RBP22.77■■□□□ 1.24
GGPS1-206ENST00000488594 GLT1D1Q96MS3 346 aa22.77■■□□□ 1.24
GGPS1-206ENST00000488594 FBXO40Q9UH90 709 aa22.77■■□□□ 1.24
GGPS1-206ENST00000488594 ELP1O95163 1332 aa22.77■■□□□ 1.24
GGPS1-206ENST00000488594 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.76■■□□□ 1.23
GGPS1-206ENST00000488594 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.76■■□□□ 1.23
GGPS1-206ENST00000488594 MINDY4BA8MYZ0 360 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 CPXCR1Q8N123 301 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 KBTBD3Q8NAB2 608 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 PCSK9Q8NBP7 692 aaKnown RBP22.76■■□□□ 1.23
GGPS1-206ENST00000488594 APPBP2Q92624 585 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 SPC25Q9HBM1 224 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 CLIP2Q9UDT6 1046 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 GREB1LQ9C091 1923 aaPredicted RBP22.76■■□□□ 1.23
GGPS1-206ENST00000488594 TIMP1P01033 207 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 ZFYP08048 801 aaPredicted RBP22.76■■□□□ 1.23
GGPS1-206ENST00000488594 GNAT2P19087 354 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 OAZ1P54368 228 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 ACVR2BQ13705 512 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 CCDC174Q6PII3 467 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 ZNF444Q8N0Y2 327 aaPredicted RBP22.76■■□□□ 1.23
GGPS1-206ENST00000488594 MKL1Q969V6 931 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 GPATCH3Q96I76 525 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 ABHD16BQ9H3Z7 469 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 SLC38A10Q9HBR0 1119 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 FEM1BQ9UK73 627 aa22.76■■□□□ 1.23
GGPS1-206ENST00000488594 MYH7P12883 1935 aa22.75■■□□□ 1.23
GGPS1-206ENST00000488594 IGKV6D-41A0A0C4DH26 115 aa22.75■■□□□ 1.23
GGPS1-206ENST00000488594 ANKRD35Q8N283 1001 aa22.75■■□□□ 1.23
GGPS1-206ENST00000488594 CHST13Q8NET6 341 aa22.75■■□□□ 1.23
GGPS1-206ENST00000488594 OSBP2Q969R2 916 aa22.75■■□□□ 1.23
GGPS1-206ENST00000488594 KIFC2Q96AC6 838 aa22.75■■□□□ 1.23
GGPS1-206ENST00000488594 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.75■■□□□ 1.23
GGPS1-206ENST00000488594 TBX21Q9UL17 535 aa22.75■■□□□ 1.23
GGPS1-206ENST00000488594 SMARCA5O60264 1052 aaPredicted RBP22.74■■□□□ 1.23
GGPS1-206ENST00000488594 C6orf222P0C671 652 aaPredicted RBP22.74■■□□□ 1.23
GGPS1-206ENST00000488594 DNAJB2P25686 324 aa22.74■■□□□ 1.23
GGPS1-206ENST00000488594 SLC4A3P48751 1232 aa22.74■■□□□ 1.23
GGPS1-206ENST00000488594 TDO2P48775 406 aa22.74■■□□□ 1.23
GGPS1-206ENST00000488594 STK11IPQ8N1F8 1099 aa22.74■■□□□ 1.23
GGPS1-206ENST00000488594 GMCL1P1Q8NEA9 526 aa22.74■■□□□ 1.23
GGPS1-206ENST00000488594 RAVER2Q9HCJ3 691 aaKnown RBP22.74■■□□□ 1.23
GGPS1-206ENST00000488594 RNF113AO15541 343 aaKnown RBP22.73■■□□□ 1.23
GGPS1-206ENST00000488594 FDX1P10109 184 aa22.73■■□□□ 1.23
GGPS1-206ENST00000488594 MFSD5Q6N075 450 aa22.73■■□□□ 1.23
GGPS1-206ENST00000488594 SYMPKQ92797 1274 aaKnown RBP22.73■■□□□ 1.23
GGPS1-206ENST00000488594 UPF3AQ9H1J1 476 aaKnown RBP22.73■■□□□ 1.23
GGPS1-206ENST00000488594 MTMR4Q9NYA4 1195 aa22.73■■□□□ 1.23
GGPS1-206ENST00000488594 MYADML2A6NDP7 307 aa22.72■■□□□ 1.23
GGPS1-206ENST00000488594 GPAA1O43292 621 aa22.72■■□□□ 1.23
GGPS1-206ENST00000488594 TTLL1O95922 423 aa22.72■■□□□ 1.23
GGPS1-206ENST00000488594 ASGR1P07306 291 aa22.72■■□□□ 1.23
GGPS1-206ENST00000488594 CDK7P50613 346 aa22.72■■□□□ 1.23
GGPS1-206ENST00000488594 GJA9P57773 515 aa22.72■■□□□ 1.23
GGPS1-206ENST00000488594 PPIGQ13427 754 aaKnown RBP eCLIP22.72■■□□□ 1.23
GGPS1-206ENST00000488594 LRRFIP1Q32MZ4 808 aaKnown RBP22.72■■□□□ 1.23
GGPS1-206ENST00000488594 CCDC144BQ3MJ40 725 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms