RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 BRI3BPQ8WY22 251 aa14.68□□□□□ -0.06
NELFE-209ENST00000488426 SPATA32Q96LK8 384 aa14.68□□□□□ -0.06
NELFE-209ENST00000488426 LZTS2Q9BRK4 669 aa14.68□□□□□ -0.06
NELFE-209ENST00000488426 TRIM34Q9BYJ4 488 aa14.68□□□□□ -0.06
NELFE-209ENST00000488426 GUCY1A2P33402 732 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 SRBD1Q8N5C6 995 aaKnown RBP14.67□□□□□ -0.06
NELFE-209ENST00000488426 LEO1Q8WVC0 666 aaPredicted RBP14.67□□□□□ -0.06
NELFE-209ENST00000488426 GZF1Q9H116 711 aaPredicted RBP14.67□□□□□ -0.06
NELFE-209ENST00000488426 DNAJC18Q9H819 358 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 GJB4Q9NTQ9 266 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 TESPA1A2RU30 521 aaPredicted RBP14.67□□□□□ -0.06
NELFE-209ENST00000488426 IRF6O14896 467 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 GADD45BO75293 160 aaPredicted RBP14.67□□□□□ -0.06
NELFE-209ENST00000488426 MMP1P03956 469 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 U2AF2P26368 475 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■■□□ 16.4
NELFE-209ENST00000488426 SAFBQ15424 915 aaKnown RBP eCLIP14.67□□□□□ -0.06
NELFE-209ENST00000488426 PKN1Q16512 942 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 TATDN1Q6P1N9 297 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 TFIP11Q9UBB9 837 aaKnown RBP14.67□□□□□ -0.06
NELFE-209ENST00000488426 MAD2L2Q9UI95 211 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 ZNF112Q9UJU3 913 aa14.67□□□□□ -0.06
NELFE-209ENST00000488426 MYH4Q9Y623 1939 aa14.66□□□□□ -0.06
NELFE-209ENST00000488426 PALM3A6NDB9 673 aaPredicted RBP14.66□□□□□ -0.06
NELFE-209ENST00000488426 SPDYE5A6NIY4 337 aa14.66□□□□□ -0.06
NELFE-209ENST00000488426 CCDC85CA6NKD9 419 aa14.66□□□□□ -0.06
NELFE-209ENST00000488426 TTLL1O95922 423 aa14.66□□□□□ -0.06
NELFE-209ENST00000488426 FAM43AQ8N2R8 423 aa14.66□□□□□ -0.06
NELFE-209ENST00000488426 SYAP1Q96A49 352 aaPredicted RBP14.66□□□□□ -0.06
NELFE-209ENST00000488426 ZNF341Q9BYN7 854 aa14.66□□□□□ -0.06
NELFE-209ENST00000488426 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.66□□□□□ -0.06
NELFE-209ENST00000488426 HERC5Q9UII4 1024 aaKnown RBP14.66□□□□□ -0.06
NELFE-209ENST00000488426 CSADQ9Y600 493 aa14.66□□□□□ -0.06
NELFE-209ENST00000488426 V9GY48 417 aaPredicted RBP14.66□□□□□ -0.06
NELFE-209ENST00000488426 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 PHF20L1A8MW92 1017 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 KIF28PB7ZC32 967 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 SMARCA1P28370 1054 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 INHBEP58166 350 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 CRHR2Q13324 411 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
NELFE-209ENST00000488426 CERKLQ49MI3 558 aaPredicted RBP14.65□□□□□ -0.06
NELFE-209ENST00000488426 MYSM1Q5VVJ2 828 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 CAVIN1Q6NZI2 390 aaKnown RBP14.65□□□□□ -0.06
NELFE-209ENST00000488426 FOXP1Q9H334 677 aaPredicted RBP14.65□□□□□ -0.06
NELFE-209ENST00000488426 RCOR1Q9UKL0 485 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 MKI67P46013 3256 aaKnown RBP14.65□□□□□ -0.06
NELFE-209ENST00000488426 CCL15-CCL14A0A0B4J2E2 113 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 PARP1P09874 1014 aaKnown RBP14.65□□□□□ -0.06
NELFE-209ENST00000488426 CCL15Q16663 113 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 USP28Q96RU2 1077 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 SPZ1Q9BXG8 430 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 CFHR5Q9BXR6 569 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 RTEL1Q9NZ71 1219 aa14.65□□□□□ -0.06
NELFE-209ENST00000488426 MPHOSPH10O00566 681 aaKnown RBP14.64□□□□□ -0.07
NELFE-209ENST00000488426 SCG2P13521 617 aa14.64□□□□□ -0.07
NELFE-209ENST00000488426 PFKFB3Q16875 520 aaPredicted RBP14.64□□□□□ -0.07
NELFE-209ENST00000488426 DCAF15Q66K64 600 aa14.64□□□□□ -0.07
NELFE-209ENST00000488426 TMEM179Q6ZVK1 233 aa14.64□□□□□ -0.07
NELFE-209ENST00000488426 CCDC84Q86UT8 332 aaPredicted RBP14.64□□□□□ -0.07
NELFE-209ENST00000488426 ERO1BQ86YB8 467 aa14.64□□□□□ -0.07
NELFE-209ENST00000488426 FAM177A1Q8N128 213 aaPredicted RBP14.64□□□□□ -0.07
NELFE-209ENST00000488426 STAG2Q8N3U4 1231 aa14.64□□□□□ -0.07
NELFE-209ENST00000488426 POLR3EQ9NVU0 708 aa14.64□□□□□ -0.07
NELFE-209ENST00000488426 YEATS4O95619 227 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 SNHG28P0DPA3 235 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 MAP3K10Q02779 954 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 RRP1BQ14684 758 aaKnown RBP14.63□□□□□ -0.07
NELFE-209ENST00000488426 ASPRV1Q53RT3 343 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 DIS3L2Q8IYB7 885 aaKnown RBP14.63□□□□□ -0.07
NELFE-209ENST00000488426 PHF20Q9BVI0 1012 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 ISY1Q9ULR0 285 aaKnown RBP14.63□□□□□ -0.07
NELFE-209ENST00000488426 GOLGA6L4A6NEF3 574 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 KLRF2D3W0D1 207 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 PDHBP11177 359 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
NELFE-209ENST00000488426 CTU1Q7Z7A3 348 aaKnown RBP14.63□□□□□ -0.07
NELFE-209ENST00000488426 SH3GLB2Q9NR46 395 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 NYAP2Q9P242 653 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 CLIP2Q9UDT6 1046 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 KCNJ14Q9UNX9 436 aa14.63□□□□□ -0.07
NELFE-209ENST00000488426 BTBD19C9JJ37 291 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 TBC1D12O60347 775 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 FKTNO75072 461 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 ALDH1A1P00352 501 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 GTF2A2P52657 109 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 MOGSQ13724 837 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 ABCB5Q2M3G0 1257 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 ZSCAN23Q3MJ62 389 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 MKL1Q969V6 931 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 BRMS1Q9HCU9 246 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 VPS54Q9P1Q0 977 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 TMEM63CQ9P1W3 806 aa14.62□□□□□ -0.07
NELFE-209ENST00000488426 hCG_1642624A0A1W2PR95 340 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 BTBD18B2RXH4 712 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 KRT2P35908 639 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 ZNF445P59923 1031 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 PPIL2Q13356 520 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 LRRC47Q8N1G4 583 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms