RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 KRT23Q9C075 422 aa27.88■■■□□ 2.05
RHBDD3-205ENST00000488106 RNF208Q9H0X6 261 aa27.88■■■□□ 2.05
RHBDD3-205ENST00000488106 ZKSCAN1P17029 563 aaPredicted RBP27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 STAT3P40763 770 aa27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 TRIM32Q13049 653 aa27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 CCL14Q16627 93 aa27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 RCSD1Q6JBY9 416 aa27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 KIAA1211Q6ZU35 1233 aa27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 IQCA1Q86XH1 822 aa27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 MROH8Q9H579 483 aa27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 CNNM2Q9H8M5 875 aa27.87■■■□□ 2.05
RHBDD3-205ENST00000488106 SLC25A27O95847 323 aa27.86■■■□□ 2.05
RHBDD3-205ENST00000488106 CYP21A2P08686 494 aa27.86■■■□□ 2.05
RHBDD3-205ENST00000488106 XRCC5P13010 732 aaKnown RBP27.86■■■□□ 2.05
RHBDD3-205ENST00000488106 SLC4A3P48751 1232 aa27.86■■■□□ 2.05
RHBDD3-205ENST00000488106 SNRNP48Q6IEG0 339 aaKnown RBP27.86■■■□□ 2.05
RHBDD3-205ENST00000488106 RIOX2Q8IUF8 465 aa27.86■■■□□ 2.05
RHBDD3-205ENST00000488106 CPXCR1Q8N123 301 aa27.86■■■□□ 2.05
RHBDD3-205ENST00000488106 RBM8AQ9Y5S9 174 aaKnown RBP27.86■■■□□ 2.05
RHBDD3-205ENST00000488106 ZBED4O75132 1171 aa27.85■■■□□ 2.05
RHBDD3-205ENST00000488106 ADORA2AP29274 412 aa27.85■■■□□ 2.05
RHBDD3-205ENST00000488106 DCAF4Q8WV16 495 aa27.85■■■□□ 2.05
RHBDD3-205ENST00000488106 TEX13BQ9BXU2 312 aa27.85■■■□□ 2.05
RHBDD3-205ENST00000488106 ZSWIM5Q9P217 1185 aa27.85■■■□□ 2.05
RHBDD3-205ENST00000488106 NT5C2P49902 561 aa27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 FAM160B2Q86V87 743 aa27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 CHURC1Q8WUH1 139 aa27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 MAP4K1Q92918 833 aa27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 TTC14Q96N46 770 aa27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 SLC38A10Q9HBR0 1119 aa27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 RAVER2Q9HCJ3 691 aaKnown RBP27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 PPP4R2Q9NY27 417 aa27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 TAF6LQ9Y6J9 622 aa27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 FRMPD2Q68DX3 1309 aaPredicted RBP27.84■■■□□ 2.05
RHBDD3-205ENST00000488106 LCTP09848 1927 aa27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 STRNO43815 780 aa27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 DPP9Q86TI2 863 aa27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 TRMT44Q8IYL2 757 aaKnown RBP27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 NPLOC4Q8TAT6 608 aa27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 ZSCAN10Q96SZ4 725 aaPredicted RBP27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 UBAC1Q9BSL1 405 aa27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 LSG1Q9H089 658 aaKnown RBP27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 TNKSO95271 1327 aa27.83■■■□□ 2.05
RHBDD3-205ENST00000488106 CDC45O75419 566 aa27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 FCER1AP12319 257 aa27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 PRKAR2AP13861 404 aaKnown RBP27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 TRDNQ13061 729 aa27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 CCDC178Q5BJE1 867 aa27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 ENAHQ8N8S7 591 aaPredicted RBP27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 MMP19Q99542 508 aa27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 ANO2Q9NQ90 1003 aa27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 FLRT1Q9NZU1 646 aa27.82■■■□□ 2.04
RHBDD3-205ENST00000488106 GJB1P08034 283 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 PDHBP11177 359 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 COPB2P35606 906 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 CASC1Q6TDU7 716 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 CYB5R4Q7L1T6 521 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 DGKHQ86XP1 1220 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 SHISA4Q96DD7 197 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.81■■■□□ 2.041e-5■■■□□ 18
RHBDD3-205ENST00000488106 GPCPD1Q9NPB8 672 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 RIPK3Q9Y572 518 aa27.81■■■□□ 2.04
RHBDD3-205ENST00000488106 BAZ2BQ9UIF8 2168 aaKnown RBP27.8■■■□□ 2.04
RHBDD3-205ENST00000488106 PLA2G6O60733 806 aa27.8■■■□□ 2.04
RHBDD3-205ENST00000488106 SLC16A2P36021 539 aa27.8■■■□□ 2.04
RHBDD3-205ENST00000488106 SNAP25P60880 206 aa27.8■■■□□ 2.04
RHBDD3-205ENST00000488106 ERICH6BQ5W0A0 696 aa27.8■■■□□ 2.04
RHBDD3-205ENST00000488106 TTBK2Q6IQ55 1244 aa27.8■■■□□ 2.04
RHBDD3-205ENST00000488106 KAT14Q9H8E8 782 aa27.8■■■□□ 2.04
RHBDD3-205ENST00000488106 PRR12Q9ULL5 1215 aa27.8■■■□□ 2.04
RHBDD3-205ENST00000488106 E7EWF7 191 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 ATP2A1O14983 1001 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 COBLO75128 1261 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 HOXC6P09630 235 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 KCTD2Q14681 263 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 CCDC174Q6PII3 467 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 STOX1Q6ZVD7 989 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 RALYLQ86SE5 291 aaKnown RBP27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 ABRAQ8N0Z2 381 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 PNMA1Q8ND90 353 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 U2AF1L4Q8WU68 220 aaKnown RBP27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 DEFB118Q96PH6 123 aa27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 PAK6Q9NQU5 681 aaPredicted RBP27.79■■■□□ 2.04
RHBDD3-205ENST00000488106 RPTORQ8N122 1335 aa27.78■■■□□ 2.04
RHBDD3-205ENST00000488106 FDX1P10109 184 aa27.78■■■□□ 2.04
RHBDD3-205ENST00000488106 GJA8P48165 433 aa27.78■■■□□ 2.04
RHBDD3-205ENST00000488106 CACNB2Q08289 660 aaPredicted RBP27.78■■■□□ 2.04
RHBDD3-205ENST00000488106 HMX1Q9NP08 348 aaPredicted RBP27.78■■■□□ 2.04
RHBDD3-205ENST00000488106 HOMER2Q9NSB8 354 aa27.78■■■□□ 2.04
RHBDD3-205ENST00000488106 ALPK3Q96L96 1907 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 PGK2P07205 417 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 OAZ1P54368 228 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 ZNF543Q08ER8 600 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 MAP3K21Q5TCX8 1036 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 SYDE2Q5VT97 1194 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 MFSD14CQ5VZR4 134 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 NCOA7Q8NI08 942 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 SLC5A4Q9NY91 659 aa27.77■■■□□ 2.04
RHBDD3-205ENST00000488106 GOLGA8HP0CJ92 632 aa27.76■■■□□ 2.03
RHBDD3-205ENST00000488106 IFIT1BQ5T764 474 aaKnown RBP27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms