RNA–Protein interactions for RNA: ENST00000488069.5

CCDC12-205, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-205ENST00000488069 CYBAP13498 195 aa21.45■■□□□ 1.02
CCDC12-205ENST00000488069 HABP4Q5JVS0 413 aaKnown RBP21.45■■□□□ 1.02
CCDC12-205ENST00000488069 SNRNP48Q6IEG0 339 aaKnown RBP21.45■■□□□ 1.02
CCDC12-205ENST00000488069 DDX20Q9UHI6 824 aaKnown RBP21.45■■□□□ 1.02
CCDC12-205ENST00000488069 ISY1Q9ULR0 285 aaKnown RBP21.45■■□□□ 1.02
CCDC12-205ENST00000488069 FGRP09769 529 aa21.44■■□□□ 1.02
CCDC12-205ENST00000488069 MAML3Q96JK9 1138 aa21.44■■□□□ 1.02
CCDC12-205ENST00000488069 TOMM22Q9NS69 142 aa21.44■■□□□ 1.02
CCDC12-205ENST00000488069 DIAPH3Q9NSV4 1193 aa21.44■■□□□ 1.02
CCDC12-205ENST00000488069 COLQQ9Y215 455 aaPredicted RBP21.44■■□□□ 1.02
CCDC12-205ENST00000488069 TACC3Q9Y6A5 838 aa21.44■■□□□ 1.02
CCDC12-205ENST00000488069 ZNFX1Q9P2E3 1918 aaKnown RBP21.43■■□□□ 1.02
CCDC12-205ENST00000488069 HIP1O00291 1037 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 ATP2A1O14983 1001 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 NMT2O60551 498 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
CCDC12-205ENST00000488069 CPXCR1Q8N123 301 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 TRPV1Q8NER1 839 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 GMCL1Q96IK5 515 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 SLC38A10Q9HBR0 1119 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 IL17RBQ9NRM6 502 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 FRMPD3Q5JV73 1810 aa21.43■■□□□ 1.02
CCDC12-205ENST00000488069 TMEM232C9JQI7 657 aa21.42■■□□□ 1.02
CCDC12-205ENST00000488069 PGK2P07205 417 aa21.42■■□□□ 1.02
CCDC12-205ENST00000488069 SLC1A4P43007 532 aa21.42■■□□□ 1.02
CCDC12-205ENST00000488069 STAT2P52630 851 aa21.42■■□□□ 1.02
CCDC12-205ENST00000488069 RRP12Q5JTH9 1297 aaKnown RBP21.42■■□□□ 1.02
CCDC12-205ENST00000488069 ALPK3Q96L96 1907 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 FDX1P10109 184 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 SLC4A3P48751 1232 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 OAZ1P54368 228 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 HAND2P61296 217 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 IKQ13123 557 aaPredicted RBP21.41■■□□□ 1.02
CCDC12-205ENST00000488069 CWC27Q6UX04 472 aaKnown RBP21.41■■□□□ 1.02
CCDC12-205ENST00000488069 CHRDL2Q6WN34 429 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 FAM160B2Q86V87 743 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 CHURC1Q8WUH1 139 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 DIS3Q9Y2L1 958 aaKnown RBP21.41■■□□□ 1.02
CCDC12-205ENST00000488069 RIPK3Q9Y572 518 aa21.41■■□□□ 1.02
CCDC12-205ENST00000488069 PFASO15067 1338 aa21.4■■□□□ 1.02
CCDC12-205ENST00000488069 SEPT4O43236 478 aa21.4■■□□□ 1.02
CCDC12-205ENST00000488069 PCP11498 1178 aaKnown RBP21.4■■□□□ 1.02
CCDC12-205ENST00000488069 COL6A1P12109 1028 aa21.4■■□□□ 1.02
CCDC12-205ENST00000488069 MCCP23508 829 aa21.4■■□□□ 1.02
CCDC12-205ENST00000488069 ZNF792Q3KQV3 632 aa21.4■■□□□ 1.02
CCDC12-205ENST00000488069 RAVER2Q9HCJ3 691 aaKnown RBP21.4■■□□□ 1.02
CCDC12-205ENST00000488069 NOVP48745 357 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 AKNAD1Q5T1N1 836 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 MFSD6Q6ZSS7 791 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 C7orf61Q8IZ16 206 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 STAG1Q8WVM7 1258 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 CHMP4CQ96CF2 233 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 DDX11Q96FC9 970 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 TINF2Q9BSI4 451 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 RNF41Q9H4P4 317 aaPredicted RBP21.39■■□□□ 1.01
CCDC12-205ENST00000488069 FBXO40Q9UH90 709 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 NRBP1Q9UHY1 535 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 PLXNA1Q9UIW2 1896 aa21.39■■□□□ 1.01
CCDC12-205ENST00000488069 TRIOBPQ9H2D6 2365 aa21.38■■□□□ 1.01
CCDC12-205ENST00000488069 PLA2G6O60733 806 aa21.38■■□□□ 1.01
CCDC12-205ENST00000488069 PRAMEF19Q5SWL8 479 aa21.38■■□□□ 1.01
CCDC12-205ENST00000488069 RCSD1Q6JBY9 416 aa21.38■■□□□ 1.01
CCDC12-205ENST00000488069 KCTD1Q719H9 257 aa21.38■■□□□ 1.01
CCDC12-205ENST00000488069 TCP11L1Q9NUJ3 509 aa21.38■■□□□ 1.01
CCDC12-205ENST00000488069 DNM1LO00429 736 aa21.37■■□□□ 1.01
CCDC12-205ENST00000488069 ZNF213O14771 459 aa21.37■■□□□ 1.01
CCDC12-205ENST00000488069 TOP1P11387 765 aaKnown RBP21.37■■□□□ 1.01
CCDC12-205ENST00000488069 PDE4AP27815 886 aa21.37■■□□□ 1.01
CCDC12-205ENST00000488069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCDC12-205ENST00000488069 TBC1D10CQ8IV04 446 aa21.37■■□□□ 1.01
CCDC12-205ENST00000488069 CHST13Q8NET6 341 aa21.37■■□□□ 1.01
CCDC12-205ENST00000488069 DCAF4Q8WV16 495 aa21.37■■□□□ 1.01
CCDC12-205ENST00000488069 MTMR7Q9Y216 660 aa21.37■■□□□ 1.01
CCDC12-205ENST00000488069 RANBP2P49792 3224 aaKnown RBP21.36■■□□□ 1.01
CCDC12-205ENST00000488069 CCDC96Q2M329 555 aa21.36■■□□□ 1.01
CCDC12-205ENST00000488069 ANO1Q5XXA6 986 aa21.36■■□□□ 1.01
CCDC12-205ENST00000488069 ANKRD35Q8N283 1001 aa21.36■■□□□ 1.01
CCDC12-205ENST00000488069 ARRDC4Q8NCT1 418 aa21.36■■□□□ 1.01
CCDC12-205ENST00000488069 LAMA4Q16363 1823 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 DNAJC25-GNG10A0A024R161 153 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 TTC22Q5TAA0 569 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 RASGRP2Q7LDG7 609 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 MSL3Q8N5Y2 521 aaKnown RBP21.35■■□□□ 1.01
CCDC12-205ENST00000488069 ESR2Q92731 530 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 TMEM47Q9BQJ4 181 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 DSCC1Q9BVC3 393 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 SENP6Q9GZR1 1112 aaPredicted RBP21.35■■□□□ 1.01
CCDC12-205ENST00000488069 HOMER2Q9NSB8 354 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 RBM27Q9P2N5 1060 aaKnown RBP21.35■■□□□ 1.01
CCDC12-205ENST00000488069 CNPY2Q9Y2B0 182 aa21.35■■□□□ 1.01
CCDC12-205ENST00000488069 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
CCDC12-205ENST00000488069 NT5C2P49902 561 aa21.34■■□□□ 1.01
CCDC12-205ENST00000488069 GJC2Q5T442 439 aaPredicted RBP21.34■■□□□ 1.01
CCDC12-205ENST00000488069 TTC14Q96N46 770 aa21.34■■□□□ 1.01
CCDC12-205ENST00000488069 ACAD9Q9H845 621 aa21.34■■□□□ 1.01
CCDC12-205ENST00000488069 PRR12Q9ULL5 1215 aa21.34■■□□□ 1.01
CCDC12-205ENST00000488069 NEDD4P46934 1319 aa21.33■■□□□ 1.01
CCDC12-205ENST00000488069 SYNGAP1Q96PV0 1343 aa21.33■■□□□ 1.01
CCDC12-205ENST00000488069 DNAH12Q6ZR08 3092 aa21.33■■□□□ 1.01
CCDC12-205ENST00000488069 KBTBD13C9JR72 458 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms