RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 PARP10Q53GL7 1025 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 ALG1LQ6GMV1 187 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 COPS6Q7L5N1 327 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 NPAS4Q8IUM7 802 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 ZKSCAN3Q9BRR0 538 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 TMX4Q9H1E5 349 aaPredicted RBP8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 NOP53Q9NZM5 478 aaKnown RBP8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 ABT1Q9ULW3 272 aaKnown RBP8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 TRPM7Q96QT4 1865 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 ABCC4O15439 1325 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 CNTNAP5Q8WYK1 1306 aa8.23□□□□□ -1.09
TNFSF4-203ENST00000488053 A0A1W2PP55 124 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 PDE2AO00408 941 aaPredicted RBP8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 TRAF5O00463 557 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 NID1P14543 1247 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 PTPRAP18433 802 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 DDX10Q13206 875 aaKnown RBP8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 COL9A3Q14050 684 aaPredicted RBP8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 RALBP1Q15311 655 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 GRIK5Q16478 980 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 DEFB115Q30KQ5 88 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 PEAR1Q5VY43 1037 aaPredicted RBP8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 GDF6Q6KF10 455 aaPredicted RBP8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 NLRP10Q86W26 655 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 WFDC8Q8IUA0 241 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 TMEM102Q8N9M5 508 aaPredicted RBP8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 NPHS2Q9NP85 383 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 DDX21Q9NR30 783 aaKnown RBP eCLIP8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 LATS2Q9NRM7 1088 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 TRMT112Q9UI30 125 aaKnown RBP8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 TRIM33Q9UPN9 1127 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 ATP6V0A2Q9Y487 856 aa8.22□□□□□ -1.09
TNFSF4-203ENST00000488053 DDX60Q8IY21 1712 aaKnown RBP8.21□□□□□ -1.09
TNFSF4-203ENST00000488053 RASSF10A6NK89 507 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 ACPPP15309 386 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 CTCFP49711 727 aaPredicted RBP8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 GMPSP49915 693 aaPredicted RBP8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 LBX1P52954 281 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 LMOD3Q0VAK6 560 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 TCIRG1Q13488 830 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 SLC10A5Q5PT55 438 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 KIAA0319Q5VV43 1072 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 DPP8Q6V1X1 898 aaPredicted RBP8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 BHLHE41Q9C0J9 482 aaPredicted RBP8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 MUC3BQ9H195 1237 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 CHPF2Q9P2E5 772 aa8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 WDR33Q9C0J8 1336 aaKnown RBP8.21□□□□□ -1.1
TNFSF4-203ENST00000488053 GADD45BO75293 160 aaPredicted RBP8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 RAD17O75943 681 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 LDHBP07195 334 aaKnown RBP8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 CXCL9Q07325 125 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 HSP90AB3PQ58FF7 597 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 USP50Q70EL3 339 aaPredicted RBP8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 DDX46Q7L014 1031 aaKnown RBP8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 NXPE3Q969Y0 559 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 TRIM11Q96F44 468 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 POP1Q99575 1024 aaKnown RBP8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 PLVAPQ9BX97 442 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 BCL2L13Q9BXK5 485 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 BABAM1Q9NWV8 329 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 GPRC5DQ9NZD1 345 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 SH3TC1Q8TE82 1336 aa8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 MYBBP1AQ9BQG0 1328 aaKnown RBP8.2□□□□□ -1.1
TNFSF4-203ENST00000488053 COL4A1P02462 1669 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 SHTN1A0MZ66 631 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 CHL1O00533 1208 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 BBOX1O75936 387 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 CDC27P30260 824 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 WDR43Q15061 677 aaKnown RBP eCLIP8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 CST9Q5W186 159 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 CIAPIN1Q6FI81 312 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 CYP4F22Q6NT55 531 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 SP8Q8IXZ3 490 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 IL22RA1Q8N6P7 574 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 SUPT20HQ8NEM7 779 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 EPS8L3Q8TE67 593 aaKnown RBP8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 CAPNS2Q96L46 248 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 GLIS2Q9BZE0 524 aaPredicted RBP8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 LACRTQ9GZZ8 138 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 EHD4Q9H223 541 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 SUV39H2Q9H5I1 410 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 PRDM10Q9NQV6 1147 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 ZNRF3Q9ULT6 936 aa8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 POLR2AP24928 1970 aaKnown RBP8.19□□□□□ -1.1
TNFSF4-203ENST00000488053 DUOX1Q9NRD9 1551 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 YDJCA8MPS7 323 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 AOC2O75106 756 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 PRPF40AO75400 957 aaKnown RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 TRPA1O75762 1119 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 CELF2O95319 508 aaKnown RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 HSPA8P11142 646 aaKnown RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 IRS1P35568 1242 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 RAC1P63000 192 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 KIAA2012Q0VF49 1180 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 GRAPQ13588 217 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 ALYREFQ86V81 257 aaKnown RBP8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 CCNJLQ8IV13 435 aa8.18□□□□□ -1.1
TNFSF4-203ENST00000488053 DTWD1Q8N5C7 304 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms