RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 GDF11O95390 407 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 C6orf222P0C671 652 aaPredicted RBP9.53□□□□□ -0.88
RTCB-205ENST00000487704 AVPR2P30518 371 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 GJA9P57773 515 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 ERVK-21P61565 698 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 MECOMQ03112 1051 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 ZYXQ15942 572 aaKnown RBP9.53□□□□□ -0.88
RTCB-205ENST00000487704 TWISTNBQ3B726 338 aaPredicted RBP9.53□□□□□ -0.88
RTCB-205ENST00000487704 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 DGLUCYQ7Z3D6 616 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 ZNF384Q8TF68 577 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 FEZ1Q99689 392 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 RPAP3Q9H6T3 665 aaPredicted RBP9.53□□□□□ -0.88
RTCB-205ENST00000487704 SPC25Q9HBM1 224 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 TLR9Q9NR96 1032 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 ABCF2Q9UG63 623 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 DMXL1Q9Y485 3027 aa9.53□□□□□ -0.88
RTCB-205ENST00000487704 DMDP11532 3685 aa9.52□□□□□ -0.88
RTCB-205ENST00000487704 A0A1B0GUL7 405 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 F6X3S4 739 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 ALDH1L1O75891 902 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 CABYRO75952 493 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 LDHCP07864 332 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
RTCB-205ENST00000487704 SMAD2Q15796 467 aaKnown RBP9.52□□□□□ -0.89
RTCB-205ENST00000487704 NBPF20Q3BBV1 942 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 NCAPG2Q86XI2 1143 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 KMT2EQ8IZD2 1858 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 PABPC5Q96DU9 382 aaKnown RBP9.52□□□□□ -0.89
RTCB-205ENST00000487704 CDCA7LQ96GN5 454 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 SCLYQ96I15 445 aa9.52□□□□□ -0.89
RTCB-205ENST00000487704 COL4A4P53420 1690 aaPredicted RBP9.51□□□□□ -0.89
RTCB-205ENST00000487704 CTAGE5O15320 804 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 SLC25A27O95847 323 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 GH2P01242 217 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 PHKA1P46020 1223 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 VCPP55072 806 aaKnown RBP9.51□□□□□ -0.89
RTCB-205ENST00000487704 ZXDAP98168 799 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 ITGA7Q13683 1181 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 COL9A2Q14055 689 aaPredicted RBP9.51□□□□□ -0.89
RTCB-205ENST00000487704 KCTD2Q14681 263 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 MAMDC4Q6UXC1 1216 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 ADSSL1Q8N142 457 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 CRACR2BQ8N4Y2 399 aaPredicted RBP9.51□□□□□ -0.89
RTCB-205ENST00000487704 TGS1Q96RS0 853 aaKnown RBP9.51□□□□□ -0.89
RTCB-205ENST00000487704 TRPV6Q9H1D0 765 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 BICC1Q9H694 974 aaKnown RBP9.51□□□□□ -0.89
RTCB-205ENST00000487704 CTNNA3Q9UI47 895 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 ZNF292O60281 2723 aa9.51□□□□□ -0.89
RTCB-205ENST00000487704 ZNFX1Q9P2E3 1918 aaKnown RBP9.5□□□□□ -0.89
RTCB-205ENST00000487704 WDR87Q6ZQQ6 2873 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 SIPA1L1O43166 1804 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 LCHNA4D1U4 455 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 EYA2O00167 538 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 B4GALT4O60513 344 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 SNAI1O95863 264 aaPredicted RBP9.5□□□□□ -0.89
RTCB-205ENST00000487704 PGK2P07205 417 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
RTCB-205ENST00000487704 DSG3P32926 999 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 RFC2P35250 354 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 GSTO1P78417 241 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 TEX11Q8IYF3 940 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 ANKRD44Q8N8A2 993 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 KLHDC4Q8TBB5 520 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 ACER1Q8TDN7 264 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 NKD2Q969F2 451 aaPredicted RBP9.5□□□□□ -0.89
RTCB-205ENST00000487704 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 MRPL38Q96DV4 380 aaKnown RBP9.5□□□□□ -0.89
RTCB-205ENST00000487704 MMP19Q99542 508 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 SIL1Q9H173 461 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 GRIN2DO15399 1336 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 TNKSO95271 1327 aa9.5□□□□□ -0.89
RTCB-205ENST00000487704 GALR2O43603 387 aaPredicted RBP9.49□□□□□ -0.89
RTCB-205ENST00000487704 BAIAP3O94812 1187 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 SIGLEC14Q08ET2 396 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 RASGRF1Q13972 1273 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 PLS1Q14651 629 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 PUM1Q14671 1186 aaKnown RBP eCLIP9.49□□□□□ -0.89
RTCB-205ENST00000487704 ATP2B3Q16720 1220 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 CCDC102BQ68D86 513 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 TATDN1Q6P1N9 297 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 ATF7IPQ6VMQ6 1270 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 DEFB128Q7Z7B8 93 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 NSUN4Q96CB9 384 aaKnown RBP9.49□□□□□ -0.89
RTCB-205ENST00000487704 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 CACNA1FO60840 1977 aa9.49□□□□□ -0.89
RTCB-205ENST00000487704 ADCY6O43306 1168 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 NCK2O43639 380 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 SUPT20HL2P0C7V6 817 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 ACVR2BQ13705 512 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 PTPROQ16827 1216 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 MCTP2Q6DN12 878 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 CXCL17Q6UXB2 119 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 ATG9AQ7Z3C6 839 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 SH3RF3Q8TEJ3 882 aaPredicted RBP9.48□□□□□ -0.89
RTCB-205ENST00000487704 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
RTCB-205ENST00000487704 ASIC4Q96FT7 647 aa9.48□□□□□ -0.89
RTCB-205ENST00000487704 SRCIN1Q9C0H9 1055 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms