RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 CKAP2LQ8IYA6 745 aa23.28■■□□□ 1.32
PHF1-209ENST00000487667 CCDC34Q96HJ3 373 aa23.28■■□□□ 1.32
PHF1-209ENST00000487667 BAZ2BQ9UIF8 2168 aaKnown RBP23.28■■□□□ 1.32
PHF1-209ENST00000487667 CLRN2A0PK11 232 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 PIK3AP1Q6ZUJ8 805 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 KRT25Q7Z3Z0 450 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 FAM200AQ8TCP9 573 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 VEZTQ9HBM0 779 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 PNMA6FA0A0J9YX94 578 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 M0R2N6 131 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 CCDC96Q2M329 555 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 SHC4Q6S5L8 630 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 PIGSQ96S52 555 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 PPP1R9BQ96SB3 815 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 GLT8D2Q9H1C3 349 aa23.27■■□□□ 1.32
PHF1-209ENST00000487667 CNTNAP1P78357 1384 aa23.26■■□□□ 1.31
PHF1-209ENST00000487667 FZD9O00144 591 aa23.26■■□□□ 1.31
PHF1-209ENST00000487667 ZRSR1Q15695 479 aaKnown RBP23.26■■□□□ 1.31
PHF1-209ENST00000487667 HOMER1Q86YM7 354 aa23.26■■□□□ 1.31
PHF1-209ENST00000487667 RNF214Q8ND24 703 aa23.26■■□□□ 1.31
PHF1-209ENST00000487667 GMCL1Q96IK5 515 aa23.26■■□□□ 1.31
PHF1-209ENST00000487667 FRMPD2Q68DX3 1309 aaPredicted RBP23.26■■□□□ 1.31
PHF1-209ENST00000487667 WNT10BO00744 389 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 ATP2B1P20020 1258 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 SLC1A4P43007 532 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 ORC2Q13416 577 aaPredicted RBP23.25■■□□□ 1.31
PHF1-209ENST00000487667 SEPT2Q15019 361 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 STX1AQ16623 288 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 ARL6IP4Q66PJ3 421 aaKnown RBP23.25■■□□□ 1.31
PHF1-209ENST00000487667 SLFN13Q68D06 897 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 PYM1Q9BRP8 204 aaKnown RBP23.25■■□□□ 1.31
PHF1-209ENST00000487667 ARHGEF10LQ9HCE6 1279 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 SMCO2A6NFE2 343 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 VEGFAP15692 232 aaPredicted RBP23.25■■□□□ 1.31
PHF1-209ENST00000487667 PRELPP51888 382 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 ATP2C1P98194 919 aaPredicted RBP23.25■■□□□ 1.31
PHF1-209ENST00000487667 UBA5Q9GZZ9 404 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 VAT1LQ9HCJ6 419 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 GPCPD1Q9NPB8 672 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 ANO10Q9NW15 660 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 KCNH3Q9ULD8 1083 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 PCDHA6Q9UN73 950 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 PCDHA8Q9Y5H6 950 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 MRVI1Q9Y6F6 885 aa23.25■■□□□ 1.31
PHF1-209ENST00000487667 FAM196BA6NMK8 535 aa23.24■■□□□ 1.31
PHF1-209ENST00000487667 LAD1O00515 517 aa23.24■■□□□ 1.31
PHF1-209ENST00000487667 EARS2Q5JPH6 523 aaKnown RBP23.24■■□□□ 1.31
PHF1-209ENST00000487667 KANK3Q6NY19 840 aa23.24■■□□□ 1.31
PHF1-209ENST00000487667 MAP3K10Q02779 954 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 TYW1BQ6NUM6 668 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 CLEC10AQ8IUN9 316 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 ADGRF4Q8IZF3 695 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 MTMR8Q96EF0 704 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 SH2D4AQ9H788 454 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 JMJD4Q9H9V9 463 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 GINM1Q9NU53 330 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 ZBTB5O15062 677 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 GH2P01242 217 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 CLIC6Q96NY7 704 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 NAT10Q9H0A0 1025 aaKnown RBP23.23■■□□□ 1.31
PHF1-209ENST00000487667 KIAA1468Q9P260 1216 aa23.23■■□□□ 1.31
PHF1-209ENST00000487667 FAM205CA6NFA0 338 aa23.22■■□□□ 1.31
PHF1-209ENST00000487667 GDF11O95390 407 aa23.22■■□□□ 1.31
PHF1-209ENST00000487667 RRAGDQ9NQL2 400 aaPredicted RBP23.22■■□□□ 1.31
PHF1-209ENST00000487667 TRAF1Q13077 416 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 NONOQ15233 471 aaKnown RBP eCLIP23.21■■□□□ 1.315e-7■■■■□ 24.9
PHF1-209ENST00000487667 ZNF174Q15697 407 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 RASGRP2Q7LDG7 609 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 REXO1Q8N1G1 1221 aaKnown RBP23.21■■□□□ 1.31
PHF1-209ENST00000487667 USP25Q9UHP3 1055 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 F5H6K3 240 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 YBX3P16989 372 aaKnown RBP eCLIP23.21■■□□□ 1.31
PHF1-209ENST00000487667 ADCY7P51828 1080 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 KLRC3Q07444 240 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 PTGDRQ13258 359 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 ANO6Q4KMQ2 910 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 TEX2Q8IWB9 1127 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 CPVLQ9H3G5 476 aa23.21■■□□□ 1.31
PHF1-209ENST00000487667 MCTP2Q6DN12 878 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 SIAH1Q8IUQ4 282 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 TRIM44Q96DX7 344 aaPredicted RBP23.2■■□□□ 1.3
PHF1-209ENST00000487667 PDLIM2Q96JY6 352 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 GOPCQ9HD26 462 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 CLCN1P35523 988 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 MRPL12P52815 198 aaKnown RBP23.2■■□□□ 1.3
PHF1-209ENST00000487667 NBPF9Q3BBW0 867 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 KRBA2Q6ZNG9 492 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 KCTD1Q719H9 257 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 CNNM3Q8NE01 707 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 HOOK2Q96ED9 719 aa23.2■■□□□ 1.3
PHF1-209ENST00000487667 GMPSP49915 693 aaPredicted RBP23.19■■□□□ 1.3
PHF1-209ENST00000487667 CSRNP2Q9H175 543 aa23.19■■□□□ 1.3
PHF1-209ENST00000487667 RIC8AQ9NPQ8 531 aa23.19■■□□□ 1.3
PHF1-209ENST00000487667 ZBTB21Q9ULJ3 1066 aa23.19■■□□□ 1.3
PHF1-209ENST00000487667 SRCAPQ6ZRS2 3230 aa23.19■■□□□ 1.3
PHF1-209ENST00000487667 ASNSP08243 561 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 BMP3P12645 472 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 LMNB1P20700 586 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 LONP1P36776 959 aaKnown RBP23.18■■□□□ 1.3
PHF1-209ENST00000487667 PRPHP41219 470 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms