RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 ANKRD33Q7Z3H0 272 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 RIOX2Q8IUF8 465 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 FTSJ3Q8IY81 847 aaKnown RBP10.13□□□□□ -0.79
HOXA9-204ENST00000487384 NUP133Q8WUM0 1156 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 VTI1AQ96AJ9 217 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 TOX2Q96NM4 488 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
HOXA9-204ENST00000487384 PBX4Q9BYU1 374 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 SH2D4AQ9H788 454 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 SWAP70Q9UH65 585 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 NRBP1Q9UHY1 535 aa10.13□□□□□ -0.79
HOXA9-204ENST00000487384 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
HOXA9-204ENST00000487384 PRRC2BQ5JSZ5 2229 aaKnown RBP10.13□□□□□ -0.79
HOXA9-204ENST00000487384 TCRBV5S4A2TA0A5A2 114 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 VWA5AO00534 786 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 RLBP1P12271 317 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 CSF2RAP15509 400 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 IGFBP4P22692 258 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 CDK8P49336 464 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 TTF1Q15361 905 aaPredicted RBP10.12□□□□□ -0.79
HOXA9-204ENST00000487384 TMEM240Q5SV17 173 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 FAM83BQ5T0W9 1011 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 MFSD5Q6N075 450 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 TSEN34Q9BSV6 310 aaKnown RBP10.12□□□□□ -0.79
HOXA9-204ENST00000487384 PPP1R12CQ9BZL4 782 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 TBX21Q9UL17 535 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 ZNF214Q9UL59 606 aaPredicted RBP10.12□□□□□ -0.79
HOXA9-204ENST00000487384 ADAMTS5Q9UNA0 930 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 DIS3Q9Y2L1 958 aaKnown RBP10.12□□□□□ -0.79
HOXA9-204ENST00000487384 ROBO3Q96MS0 1386 aa10.12□□□□□ -0.79
HOXA9-204ENST00000487384 MOXD2PA6NHM9 499 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 ADCY6O43306 1168 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 MBD4O95243 580 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 SNAI1O95863 264 aaPredicted RBP10.11□□□□□ -0.79
HOXA9-204ENST00000487384 CHGBP05060 677 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 C6orf222P0C671 652 aaPredicted RBP10.11□□□□□ -0.79
HOXA9-204ENST00000487384 PPIGQ13427 754 aaKnown RBP eCLIP10.11□□□□□ -0.79
HOXA9-204ENST00000487384 ADGRE1Q14246 886 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 CEP85Q6P2H3 762 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 TMED8Q6PL24 325 aaPredicted RBP10.11□□□□□ -0.79
HOXA9-204ENST00000487384 ZNF365Q70YC5 407 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 KLHDC9Q8NEP7 349 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 REPS2Q8NFH8 660 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 ADAMTS19Q8TE59 1207 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 DDX11Q96FC9 970 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 GLT1D1Q96MS3 346 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 ASB2Q96Q27 587 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 NUP88Q99567 741 aaPredicted RBP10.11□□□□□ -0.79
HOXA9-204ENST00000487384 THEGQ9P2T0 379 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 FAM184BQ9ULE4 1060 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 PPP1R9AQ9ULJ8 1098 aa10.11□□□□□ -0.79
HOXA9-204ENST00000487384 GREB1LQ9C091 1923 aaPredicted RBP10.1□□□□□ -0.79
HOXA9-204ENST00000487384 USP17L12C9JPN9 530 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 USP17L21D6R901 530 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 ASGR1P07306 291 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 CYP2C18P33260 490 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 C12orf60Q5U649 245 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 SNRNP48Q6IEG0 339 aaKnown RBP10.1□□□□□ -0.79
HOXA9-204ENST00000487384 CCSAPQ6IQ19 270 aaPredicted RBP10.1□□□□□ -0.79
HOXA9-204ENST00000487384 ERC1Q8IUD2 1116 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 CPXCR1Q8N123 301 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 STK11IPQ8N1F8 1099 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 ATXN2LQ8WWM7 1075 aaKnown RBP10.1□□□□□ -0.79
HOXA9-204ENST00000487384 CCDC17Q96LX7 622 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 UHRF1Q96T88 793 aaPredicted RBP10.1□□□□□ -0.79
HOXA9-204ENST00000487384 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 CXXC1Q9P0U4 656 aaPredicted RBP10.1□□□□□ -0.79
HOXA9-204ENST00000487384 RIPK3Q9Y572 518 aa10.1□□□□□ -0.79
HOXA9-204ENST00000487384 MROH7Q68CQ1 1323 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 SYNGAP1Q96PV0 1343 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 BRWD1Q9NSI6 2320 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 DUSP11O75319 330 aaKnown RBP10.09□□□□□ -0.79
HOXA9-204ENST00000487384 CDK7P50613 346 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 MRPS5P82675 430 aaKnown RBP10.09□□□□□ -0.79
HOXA9-204ENST00000487384 ACVR2BQ13705 512 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 CCDC144BQ3MJ40 725 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 GNASQ5JWF2 1037 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 AKNAD1Q5T1N1 836 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 RASIP1Q5U651 963 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 CCDC174Q6PII3 467 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 C16orf86Q6ZW13 317 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 AMOTL1Q8IY63 956 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 TMEM199Q8N511 208 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 IL27Q8NEV9 243 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 RHPN1Q8TCX5 695 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 NECAB3Q96P71 396 aaPredicted RBP10.09□□□□□ -0.79
HOXA9-204ENST00000487384 SLF1Q9BQI6 1058 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 TEX13BQ9BXU2 312 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 NKX2-4Q9H2Z4 354 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 KANSL2Q9H9L4 492 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 ATP8A2Q9NTI2 1148 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 MSRAQ9UJ68 235 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 SCN5AQ14524 2016 aa10.09□□□□□ -0.79
HOXA9-204ENST00000487384 ELP1O95163 1332 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 A0A0U1RQG5 324 aaPredicted RBP10.08□□□□□ -0.8
HOXA9-204ENST00000487384 ARVCFO00192 962 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 IFIT2P09913 472 aaKnown RBP10.08□□□□□ -0.8
HOXA9-204ENST00000487384 COPB2P35606 906 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 ADD2P35612 726 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms