RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 ZSCAN23Q3MJ62 389 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 ANGEL2Q5VTE6 544 aaKnown RBP7.06□□□□□ -1.28
VAMP3-203ENST00000487194 WWC2Q6AWC2 1192 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 CCDC73Q6ZRK6 1079 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 SIAH1Q8IUQ4 282 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 ADGRF4Q8IZF3 695 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 BLIDQ8IZY5 108 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 OXER1Q8TDS5 423 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 GPKOWQ92917 476 aaPredicted RBP eCLIP7.06□□□□□ -1.28
VAMP3-203ENST00000487194 TNFRSF25Q93038 417 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 MTMR8Q96EF0 704 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 PGBD1Q96JS3 809 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 PIGSQ96S52 555 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 UBA5Q9GZZ9 404 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 ZMYND12Q9H0C1 365 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 JMJD4Q9H9V9 463 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 VAT1LQ9HCJ6 419 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.06□□□□□ -1.28
VAMP3-203ENST00000487194 DDX19AQ9NUU7 478 aaKnown RBP7.06□□□□□ -1.28
VAMP3-203ENST00000487194 TMEM63CQ9P1W3 806 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 TMX2Q9Y320 296 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 CLIC4Q9Y696 253 aa7.06□□□□□ -1.28
VAMP3-203ENST00000487194 BAZ2BQ9UIF8 2168 aaKnown RBP7.06□□□□□ -1.28
VAMP3-203ENST00000487194 CCDC194A0A1B0GVG4 234 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 GOLGA6L3A6NEY3 463 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 SMCO2A6NFE2 343 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 CUTAO60888 179 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 DDNO94850 711 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-203ENST00000487194 CMA1P23946 247 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 EPS15P42566 896 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 JAG1P78504 1218 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 IKQ13123 557 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-203ENST00000487194 PTPAQ15257 358 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 NPY5RQ15761 445 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 L1TD1Q5T7N2 865 aaKnown RBP7.05□□□□□ -1.28
VAMP3-203ENST00000487194 MCTP2Q6DN12 878 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 BTNL9Q6UXG8 535 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 KCTD1Q719H9 257 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 RASGRP2Q7LDG7 609 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 KRT25Q7Z3Z0 450 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 TEX2Q8IWB9 1127 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 CDAN1Q8IWY9 1227 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 CCAR1Q8IX12 1150 aaKnown RBP7.05□□□□□ -1.28
VAMP3-203ENST00000487194 TRPM4Q8TD43 1214 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 CHURC1Q8WUH1 139 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 MRPS27Q92552 414 aaKnown RBP7.05□□□□□ -1.28
VAMP3-203ENST00000487194 DCPSQ96C86 337 aaKnown RBP7.05□□□□□ -1.28
VAMP3-203ENST00000487194 SHISA4Q96DD7 197 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 L3MBTL3Q96JM7 780 aaPredicted RBP7.05□□□□□ -1.28
VAMP3-203ENST00000487194 FTOQ9C0B1 505 aaKnown RBP eCLIP7.05□□□□□ -1.28
VAMP3-203ENST00000487194 VCPKMTQ9H867 229 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 AS3MTQ9HBK9 375 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 GGA3Q9NZ52 723 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 PCDHA7Q9UN72 937 aa7.05□□□□□ -1.28
VAMP3-203ENST00000487194 ASTN2O75129 1339 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 A0A1W2PRG0 241 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 USP17L10C9JJH3 530 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 TMEM232C9JQI7 657 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 M0R2N6 131 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 CTAGE5O15320 804 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 PLA2G6O60733 806 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 KINO60870 393 aaKnown RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 VEGFAP15692 232 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 TOB1P50616 345 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 ADCY7P51828 1080 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 STAT2P52630 851 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 MRPL12P52815 198 aaKnown RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 USP14P54578 494 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 ORC2Q13416 577 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 NONOQ15233 471 aaKnown RBP eCLIP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 SHROOM1Q2M3G4 852 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 TPRNQ4KMQ1 711 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 TTC38Q5R3I4 469 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 NBPF12Q5TAG4 269 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 SYDE2Q5VT97 1194 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 TTBK2Q6IQ55 1244 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 TYW1BQ6NUM6 668 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 LRSAM1Q6UWE0 723 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 PIK3AP1Q6ZUJ8 805 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 USP50Q70EL3 339 aaPredicted RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 FAM160B2Q86V87 743 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 SCYL3Q8IZE3 742 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 REXO1Q8N1G1 1221 aaKnown RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 KRI1Q8N9T8 703 aaKnown RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 FSIP1Q8NA03 581 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 ZNF579Q8NAF0 562 aaKnown RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 ACER1Q8TDN7 264 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 ZC3H15Q8WU90 426 aaKnown RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 LPAR1Q92633 364 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 CUL5Q93034 780 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 FERMT2Q96AC1 680 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 FEZ1Q99689 392 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 AMNQ9BXJ7 453 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 NUP62CLQ9H1M0 184 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 CPVLQ9H3G5 476 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 CLSTN2Q9H4D0 955 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 PICK1Q9NRD5 415 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 DACT1Q9NYF0 836 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 ZNF112Q9UJU3 913 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms