RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 SLC38A10Q9HBR0 1119 aa17.12■□□□□ 0.33
LIMS3-205ENST00000487150 SLC5A4Q9NY91 659 aa17.12■□□□□ 0.33
LIMS3-205ENST00000487150 BTBD7Q9P203 1132 aa17.12■□□□□ 0.33
LIMS3-205ENST00000487150 FBXO40Q9UH90 709 aa17.12■□□□□ 0.33
LIMS3-205ENST00000487150 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
LIMS3-205ENST00000487150 DDAH1O94760 285 aa17.11■□□□□ 0.33
LIMS3-205ENST00000487150 PARP1P09874 1014 aaKnown RBP17.11■□□□□ 0.33
LIMS3-205ENST00000487150 STAT3P40763 770 aa17.11■□□□□ 0.33
LIMS3-205ENST00000487150 LIFRP42702 1097 aa17.11■□□□□ 0.33
LIMS3-205ENST00000487150 PRKCZQ05513 592 aa17.11■□□□□ 0.33
LIMS3-205ENST00000487150 SLC9C1Q4G0N8 1177 aa17.11■□□□□ 0.33
LIMS3-205ENST00000487150 SYDE2Q5VT97 1194 aa17.11■□□□□ 0.33
LIMS3-205ENST00000487150 GPR142Q7Z601 462 aa17.11■□□□□ 0.33
LIMS3-205ENST00000487150 MOV10L1Q9BXT6 1211 aaKnown RBP17.11■□□□□ 0.33
LIMS3-205ENST00000487150 ZNF214Q9UL59 606 aaPredicted RBP17.11■□□□□ 0.33
LIMS3-205ENST00000487150 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
LIMS3-205ENST00000487150 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 CCDC69A6NI79 296 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 SLC15A5A6NIM6 579 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 CALM1P0DP23 149 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 CALM2P0DP24 149 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 CALM3P0DP25 149 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 KIF5BP33176 963 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 RGS2P41220 211 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 FLT3LGP49771 235 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 TMEM132BQ14DG7 1078 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 TKFCQ3LXA3 575 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 NFXL1Q6ZNB6 911 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 DHX32Q7L7V1 743 aaKnown RBP17.1■□□□□ 0.33
LIMS3-205ENST00000487150 NCAPG2Q86XI2 1143 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 MAP3K14Q99558 947 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 PORCNQ9H237 461 aa17.1■□□□□ 0.33
LIMS3-205ENST00000487150 CASP8AP2Q9UKL3 1982 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 XRCC5P13010 732 aaKnown RBP17.09■□□□□ 0.33
LIMS3-205ENST00000487150 ERCC3P19447 782 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 FGD1P98174 961 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 SNRNP48Q6IEG0 339 aaKnown RBP17.09■□□□□ 0.33
LIMS3-205ENST00000487150 BLOC1S2Q6QNY1 142 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 SYNE3Q6ZMZ3 975 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 REPS2Q8NFH8 660 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 PXYLP1Q8TE99 480 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 ABHD8Q96I13 439 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 APBA2Q99767 749 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 PRR12Q9ULL5 1215 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 HPS5Q9UPZ3 1129 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 PTCH2Q9Y6C5 1203 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
LIMS3-205ENST00000487150 MYH4Q9Y623 1939 aa17.09■□□□□ 0.33
LIMS3-205ENST00000487150 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
LIMS3-205ENST00000487150 FCER1AP12319 257 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 PTPREP23469 700 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 CTGFP29279 349 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 ANTXR2P58335 489 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 ANAPC15P60006 121 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 TRAF1Q13077 416 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 GRB14Q14449 540 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 KCTD2Q14681 263 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 Q3C1V9 767 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 POTEEQ6S8J3 1075 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 CHST13Q8NET6 341 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.32
LIMS3-205ENST00000487150 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 IGDCC4Q8TDY8 1250 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
LIMS3-205ENST00000487150 USP26Q9BXU7 913 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 LY9Q9HBG7 655 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.32
LIMS3-205ENST00000487150 ECM2O94769 699 aaPredicted RBP17.07■□□□□ 0.32
LIMS3-205ENST00000487150 ICAM1P05362 532 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 GRK4P32298 578 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 GNAQP50148 359 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 RCAN1P53805 252 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 UBXN2AP68543 259 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 MAP2K5Q13163 448 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 SGMS1Q86VZ5 419 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 ARMC5Q96C12 935 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 RANBP17Q9H2T7 1088 aaKnown RBP17.07■□□□□ 0.32
LIMS3-205ENST00000487150 SNX14Q9Y5W7 946 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 SLC12A7Q9Y666 1083 aa17.07■□□□□ 0.32
LIMS3-205ENST00000487150 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
LIMS3-205ENST00000487150 ADCY3O60266 1144 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 CAP1Q01518 475 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 GRM4Q14833 912 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 MORN1Q5T089 497 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.06■□□□□ 0.32
LIMS3-205ENST00000487150 CHST3Q7LGC8 479 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 ZNF654Q8IZM8 581 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 MMP19Q99542 508 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 LZTS2Q9BRK4 669 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 MAF1Q9H063 256 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 RAVER2Q9HCJ3 691 aaKnown RBP17.06■□□□□ 0.32
LIMS3-205ENST00000487150 CCPG1Q9ULG6 757 aa17.06■□□□□ 0.32
LIMS3-205ENST00000487150 KLRF2D3W0D1 207 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 HMGCRP04035 888 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 HOXC6P09630 235 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 SLC16A2P36021 539 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 TROAPQ12815 778 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms