RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 NMIQ13287 307 aaPredicted RBP22.63■■□□□ 1.21
CLIP2-206ENST00000487091 KCTD2Q14681 263 aa22.63■■□□□ 1.21
CLIP2-206ENST00000487091 CHRDL2Q6WN34 429 aa22.63■■□□□ 1.21
CLIP2-206ENST00000487091 INCENPQ9NQS7 918 aa22.63■■□□□ 1.21
CLIP2-206ENST00000487091 FRMPD3Q5JV73 1810 aa22.63■■□□□ 1.21
CLIP2-206ENST00000487091 PFASO15067 1338 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 ZMYM6O95789 1325 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 FDX1P10109 184 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 SDSP20132 328 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 SNRNP48Q6IEG0 339 aaKnown RBP22.62■■□□□ 1.21
CLIP2-206ENST00000487091 GMCL1Q96IK5 515 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 SLC38A10Q9HBR0 1119 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 IL17RBQ9NRM6 502 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 TACC3Q9Y6A5 838 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 TRIOBPQ9H2D6 2365 aa22.62■■□□□ 1.21
CLIP2-206ENST00000487091 CCDC171Q6TFL3 1326 aa22.61■■□□□ 1.21
CLIP2-206ENST00000487091 RANBP6O60518 1105 aaKnown RBP22.61■■□□□ 1.21
CLIP2-206ENST00000487091 NOVP48745 357 aa22.61■■□□□ 1.21
CLIP2-206ENST00000487091 MFAP1P55081 439 aaKnown RBP22.61■■□□□ 1.21
CLIP2-206ENST00000487091 ZNF792Q3KQV3 632 aa22.61■■□□□ 1.21
CLIP2-206ENST00000487091 ZNF589Q86UQ0 364 aaPredicted RBP22.61■■□□□ 1.21
CLIP2-206ENST00000487091 KIFC2Q96AC6 838 aa22.61■■□□□ 1.21
CLIP2-206ENST00000487091 PRO3102Q9H379 93 aa22.61■■□□□ 1.21
CLIP2-206ENST00000487091 NRBP1Q9UHY1 535 aa22.61■■□□□ 1.21
CLIP2-206ENST00000487091 CTDP1Q9Y5B0 961 aaPredicted RBP22.61■■□□□ 1.21
CLIP2-206ENST00000487091 SEPT4O43236 478 aa22.6■■□□□ 1.21
CLIP2-206ENST00000487091 OAZ1P54368 228 aa22.6■■□□□ 1.21
CLIP2-206ENST00000487091 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.6■■□□□ 1.21
CLIP2-206ENST00000487091 CHURC1Q8WUH1 139 aa22.6■■□□□ 1.21
CLIP2-206ENST00000487091 STX8Q9UNK0 236 aa22.6■■□□□ 1.21
CLIP2-206ENST00000487091 RIPK3Q9Y572 518 aa22.6■■□□□ 1.21
CLIP2-206ENST00000487091 PLXNA1Q9UIW2 1896 aa22.6■■□□□ 1.21
CLIP2-206ENST00000487091 PLA2G6O60733 806 aa22.59■■□□□ 1.21
CLIP2-206ENST00000487091 PGK2P07205 417 aa22.59■■□□□ 1.21
CLIP2-206ENST00000487091 SLC1A4P43007 532 aa22.59■■□□□ 1.21
CLIP2-206ENST00000487091 FAM160B2Q86V87 743 aa22.59■■□□□ 1.21
CLIP2-206ENST00000487091 CPXCR1Q8N123 301 aa22.59■■□□□ 1.21
CLIP2-206ENST00000487091 STAG1Q8WVM7 1258 aa22.59■■□□□ 1.21
CLIP2-206ENST00000487091 RBM27Q9P2N5 1060 aaKnown RBP22.59■■□□□ 1.21
CLIP2-206ENST00000487091 TMEM232C9JQI7 657 aa22.58■■□□□ 1.21
CLIP2-206ENST00000487091 DNM1LO00429 736 aa22.58■■□□□ 1.21
CLIP2-206ENST00000487091 PCP11498 1178 aaKnown RBP22.58■■□□□ 1.21
CLIP2-206ENST00000487091 MCCP23508 829 aa22.58■■□□□ 1.21
CLIP2-206ENST00000487091 FXR1P51114 621 aaKnown RBP eCLIP22.58■■□□□ 1.21
CLIP2-206ENST00000487091 STAT2P52630 851 aa22.58■■□□□ 1.21
CLIP2-206ENST00000487091 PRAMEF19Q5SWL8 479 aa22.58■■□□□ 1.21
CLIP2-206ENST00000487091 C7orf61Q8IZ16 206 aa22.58■■□□□ 1.21
CLIP2-206ENST00000487091 ARRDC4Q8NCT1 418 aa22.58■■□□□ 1.21
CLIP2-206ENST00000487091 TINF2Q9BSI4 451 aa22.58■■□□□ 1.21
CLIP2-206ENST00000487091 RAVER2Q9HCJ3 691 aaKnown RBP22.58■■□□□ 1.21
CLIP2-206ENST00000487091 HIP1O00291 1037 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 NMT2O60551 498 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 RCSD1Q6JBY9 416 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 MSL3Q8N5Y2 521 aaKnown RBP22.57■■□□□ 1.2
CLIP2-206ENST00000487091 CHST13Q8NET6 341 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 DDX11Q96FC9 970 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 TOMM22Q9NS69 142 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 TCP11L1Q9NUJ3 509 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 FBXO40Q9UH90 709 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 SMCHD1A6NHR9 2005 aa22.57■■□□□ 1.2
CLIP2-206ENST00000487091 DNAJC25-GNG10A0A024R161 153 aa22.56■■□□□ 1.2
CLIP2-206ENST00000487091 SLC4A3P48751 1232 aa22.55■■□□□ 1.2
CLIP2-206ENST00000487091 RRP12Q5JTH9 1297 aaKnown RBP22.55■■□□□ 1.2
CLIP2-206ENST00000487091 AKNAD1Q5T1N1 836 aa22.55■■□□□ 1.2
CLIP2-206ENST00000487091 SENP6Q9GZR1 1112 aaPredicted RBP22.55■■□□□ 1.2
CLIP2-206ENST00000487091 DIAPH3Q9NSV4 1193 aa22.55■■□□□ 1.2
CLIP2-206ENST00000487091 ISY1Q9ULR0 285 aaKnown RBP22.55■■□□□ 1.2
CLIP2-206ENST00000487091 RANBP2P49792 3224 aaKnown RBP22.55■■□□□ 1.2
CLIP2-206ENST00000487091 A0A1W2PPC1 479 aa22.54■■□□□ 1.2
CLIP2-206ENST00000487091 HAND2P61296 217 aa22.54■■□□□ 1.2
CLIP2-206ENST00000487091 IKQ13123 557 aaPredicted RBP22.54■■□□□ 1.2
CLIP2-206ENST00000487091 LRRC26Q2I0M4 334 aa22.54■■□□□ 1.2
CLIP2-206ENST00000487091 CWC27Q6UX04 472 aaKnown RBP22.54■■□□□ 1.2
CLIP2-206ENST00000487091 MAMDC4Q6UXC1 1216 aa22.54■■□□□ 1.2
CLIP2-206ENST00000487091 MFSD6Q6ZSS7 791 aa22.54■■□□□ 1.2
CLIP2-206ENST00000487091 ZNF467Q7Z7K2 595 aaPredicted RBP22.54■■□□□ 1.2
CLIP2-206ENST00000487091 RNF41Q9H4P4 317 aaPredicted RBP22.54■■□□□ 1.2
CLIP2-206ENST00000487091 TOP1P11387 765 aaKnown RBP22.53■■□□□ 1.2
CLIP2-206ENST00000487091 NT5C2P49902 561 aa22.53■■□□□ 1.2
CLIP2-206ENST00000487091 GJC2Q5T442 439 aaPredicted RBP22.53■■□□□ 1.2
CLIP2-206ENST00000487091 ANO1Q5XXA6 986 aa22.53■■□□□ 1.2
CLIP2-206ENST00000487091 KCTD1Q719H9 257 aa22.53■■□□□ 1.2
CLIP2-206ENST00000487091 ANKRD35Q8N283 1001 aa22.53■■□□□ 1.2
CLIP2-206ENST00000487091 DCAF4Q8WV16 495 aa22.53■■□□□ 1.2
CLIP2-206ENST00000487091 ZMYND8Q9ULU4 1186 aaPredicted RBP22.53■■□□□ 1.2
CLIP2-206ENST00000487091 SYNGAP1Q96PV0 1343 aa22.53■■□□□ 1.2
CLIP2-206ENST00000487091 KBTBD13C9JR72 458 aa22.52■■□□□ 1.2
CLIP2-206ENST00000487091 ZNF865P0CJ78 1059 aaPredicted RBP22.52■■□□□ 1.2
CLIP2-206ENST00000487091 BMP8BP34820 402 aa22.52■■□□□ 1.2
CLIP2-206ENST00000487091 TKFCQ3LXA3 575 aa22.52■■□□□ 1.2
CLIP2-206ENST00000487091 TTC14Q96N46 770 aa22.52■■□□□ 1.2
CLIP2-206ENST00000487091 GDF15Q99988 308 aa22.52■■□□□ 1.2
CLIP2-206ENST00000487091 CNPY2Q9Y2B0 182 aa22.52■■□□□ 1.2
CLIP2-206ENST00000487091 ZNF536O15090 1300 aa22.52■■□□□ 1.2
CLIP2-206ENST00000487091 ZNF213O14771 459 aa22.51■■□□□ 1.19
CLIP2-206ENST00000487091 RARBP10826 455 aa22.51■■□□□ 1.19
CLIP2-206ENST00000487091 LRRC41Q15345 812 aa22.51■■□□□ 1.19
CLIP2-206ENST00000487091 CHMP4CQ96CF2 233 aa22.51■■□□□ 1.19
CLIP2-206ENST00000487091 TMEM47Q9BQJ4 181 aa22.51■■□□□ 1.19
CLIP2-206ENST00000487091 DSCC1Q9BVC3 393 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms