RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 KLHDC9Q8NEP7 349 aa9.27□□□□□ -0.93
PDPN-205ENST00000487038 LENG1Q96BZ8 264 aaPredicted RBP9.27□□□□□ -0.93
PDPN-205ENST00000487038 NECAB3Q96P71 396 aaPredicted RBP9.27□□□□□ -0.93
PDPN-205ENST00000487038 LRFN3Q9BTN0 628 aa9.27□□□□□ -0.93
PDPN-205ENST00000487038 CRNKL1Q9BZJ0 848 aaKnown RBP9.27□□□□□ -0.93
PDPN-205ENST00000487038 VCPKMTQ9H867 229 aa9.27□□□□□ -0.93
PDPN-205ENST00000487038 MCM9Q9NXL9 1143 aa9.27□□□□□ -0.93
PDPN-205ENST00000487038 COG5Q9UP83 839 aa9.27□□□□□ -0.93
PDPN-205ENST00000487038 TMX2Q9Y320 296 aa9.27□□□□□ -0.93
PDPN-205ENST00000487038 MAGEB6P1A0A0J9YX57 407 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 PNMA6EA0A0J9YXQ4 647 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 TAL1P17542 331 aaPredicted RBP9.26□□□□□ -0.93
PDPN-205ENST00000487038 STAT3P40763 770 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 CDK7P50613 346 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 KCNQ1P51787 676 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 GABPAQ06546 454 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 CCSAPQ6IQ19 270 aaPredicted RBP9.26□□□□□ -0.93
PDPN-205ENST00000487038 C16orf59Q7L2K0 433 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 AMOTL1Q8IY63 956 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 ARHGAP45Q92619 1136 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 DDX11Q96FC9 970 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 GOPCQ9HD26 462 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 PCDHA11Q9Y5I1 949 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 SLC4A7Q9Y6M7 1214 aa9.26□□□□□ -0.93
PDPN-205ENST00000487038 CACNA1AO00555 2505 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 GJA9P57773 515 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 TFF2Q03403 129 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 TTF1Q15361 905 aaPredicted RBP9.25□□□□□ -0.93
PDPN-205ENST00000487038 MAMDC4Q6UXC1 1216 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 OTOP2Q7RTS6 562 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 ZNF467Q7Z7K2 595 aaPredicted RBP9.25□□□□□ -0.93
PDPN-205ENST00000487038 RPUSD2Q8IZ73 545 aaKnown RBP9.25□□□□□ -0.93
PDPN-205ENST00000487038 RIOK1Q9BRS2 568 aaKnown RBP9.25□□□□□ -0.93
PDPN-205ENST00000487038 TEX13BQ9BXU2 312 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 SEZ6LQ9BYH1 1024 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 ABHD16BQ9H3Z7 469 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 HIPK3Q9H422 1215 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 DBNLQ9UJU6 430 aaKnown RBP9.25□□□□□ -0.93
PDPN-205ENST00000487038 ZNF214Q9UL59 606 aaPredicted RBP9.25□□□□□ -0.93
PDPN-205ENST00000487038 ADAMTS5Q9UNA0 930 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 YBX2Q9Y2T7 364 aaKnown RBP9.25□□□□□ -0.93
PDPN-205ENST00000487038 SCN5AQ14524 2016 aa9.25□□□□□ -0.93
PDPN-205ENST00000487038 SIP14410 1827 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 MYADML2A6NDP7 307 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 ZBBXA8MT70 800 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 VWA5AO00534 786 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 IPO8O15397 1037 aaKnown RBP9.24□□□□□ -0.93
PDPN-205ENST00000487038 RAD21O60216 631 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 CABYRO75952 493 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 PFKMP08237 780 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 CYP2C18P33260 490 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 ACVR2BQ13705 512 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 GNASQ5JWF2 1037 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 KIAA1755Q5JYT7 1200 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 CCDC17Q96LX7 622 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 UPF3AQ9H1J1 476 aaKnown RBP9.24□□□□□ -0.93
PDPN-205ENST00000487038 PPP1R9AQ9ULJ8 1098 aa9.24□□□□□ -0.93
PDPN-205ENST00000487038 CTDP1Q9Y5B0 961 aaPredicted RBP9.24□□□□□ -0.93
PDPN-205ENST00000487038 PTPRSQ13332 1948 aa9.23□□□□□ -0.93
PDPN-205ENST00000487038 PRRC2BQ5JSZ5 2229 aaKnown RBP9.23□□□□□ -0.93
PDPN-205ENST00000487038 ZEB2O60315 1214 aa9.23□□□□□ -0.93
PDPN-205ENST00000487038 GPR37L1O60883 481 aa9.23□□□□□ -0.93
PDPN-205ENST00000487038 SURF6O75683 361 aaKnown RBP9.23□□□□□ -0.93
PDPN-205ENST00000487038 CD4P01730 458 aa9.23□□□□□ -0.93
PDPN-205ENST00000487038 ATP2A2P16615 1042 aaKnown RBP9.23□□□□□ -0.93
PDPN-205ENST00000487038 POU3F3P20264 500 aaPredicted RBP9.23□□□□□ -0.93
PDPN-205ENST00000487038 CCDC144BQ3MJ40 725 aa9.23□□□□□ -0.93
PDPN-205ENST00000487038 TMEM67Q5HYA8 995 aa9.23□□□□□ -0.93
PDPN-205ENST00000487038 SNRNP48Q6IEG0 339 aaKnown RBP9.23□□□□□ -0.93
PDPN-205ENST00000487038 DDRGK1Q96HY6 314 aa9.23□□□□□ -0.93
PDPN-205ENST00000487038 EPHX3Q9H6B9 360 aa9.23□□□□□ -0.93
PDPN-205ENST00000487038 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.23□□□□□ -0.93
PDPN-205ENST00000487038 SNAI1O95863 264 aaPredicted RBP9.22□□□□□ -0.93
PDPN-205ENST00000487038 ACTN1P12814 892 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 AKR1B1P15121 316 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 RABGGTBP53611 331 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 CCL23P55773 120 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 POLA2Q14181 598 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 FAM83BQ5T0W9 1011 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 CLEC10AQ8IUN9 316 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 ANKRD35Q8N283 1001 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 SDR42E1Q8WUS8 393 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 HLA-CQ95604 372 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 SLC9A7Q96T83 725 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 SLF1Q9BQI6 1058 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 CCDC8Q9H0W5 538 aaPredicted RBP9.22□□□□□ -0.93
PDPN-205ENST00000487038 ANTXR1Q9H6X2 564 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 KANSL2Q9H9L4 492 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 DCP1AQ9NPI6 582 aaPredicted RBP9.22□□□□□ -0.93
PDPN-205ENST00000487038 FBXO28Q9NVF7 368 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 TLR7Q9NYK1 1049 aaKnown RBP9.22□□□□□ -0.93
PDPN-205ENST00000487038 FBXO40Q9UH90 709 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 MTCH2Q9Y6C9 303 aa9.22□□□□□ -0.93
PDPN-205ENST00000487038 DNAJC25-GNG10A0A024R161 153 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 CA3P07451 260 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 EEF2P13639 858 aaKnown RBP9.21□□□□□ -0.94
PDPN-205ENST00000487038 RARSP54136 660 aaKnown RBP9.21□□□□□ -0.94
PDPN-205ENST00000487038 ITGA7Q13683 1181 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 SLC9C2Q5TAH2 1124 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 NOL8Q76FK4 1167 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms