RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 LENG1Q96BZ8 264 aaPredicted RBP24.02■■□□□ 1.44
PHF1-208ENST00000486845 DDX11Q96FC9 970 aa24.02■■□□□ 1.44
PHF1-208ENST00000486845 TOX2Q96NM4 488 aa24.02■■□□□ 1.44
PHF1-208ENST00000486845 STARD7Q9NQZ5 370 aa24.02■■□□□ 1.44
PHF1-208ENST00000486845 FAM184BQ9ULE4 1060 aa24.02■■□□□ 1.44
PHF1-208ENST00000486845 DCDC2CA8MYV0 355 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 FOSL2P15408 326 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 ACLYP53396 1101 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 EPHB4P54760 987 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 SBK1Q52WX2 424 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 ANKRD33Q7Z3H0 272 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 NUP88Q99567 741 aaPredicted RBP24.01■■□□□ 1.43
PHF1-208ENST00000486845 MKNK2Q9HBH9 465 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 NYAP2Q9P242 653 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 SYNRGQ9UMZ2 1314 aa24.01■■□□□ 1.43
PHF1-208ENST00000486845 MOXD2PA6NHM9 499 aa24■■□□□ 1.43
PHF1-208ENST00000486845 RASA1P20936 1047 aa24■■□□□ 1.43
PHF1-208ENST00000486845 MAMDC4Q6UXC1 1216 aa24■■□□□ 1.43
PHF1-208ENST00000486845 PRPF38AQ8NAV1 312 aaKnown RBP24■■□□□ 1.43
PHF1-208ENST00000486845 STRBPQ96SI9 672 aaKnown RBP24■■□□□ 1.43
PHF1-208ENST00000486845 LRRCC1Q9C099 1032 aa24■■□□□ 1.43
PHF1-208ENST00000486845 DNAJC25-GNG10A0A024R161 153 aa23.99■■□□□ 1.43
PHF1-208ENST00000486845 F5H6K3 240 aa23.99■■□□□ 1.43
PHF1-208ENST00000486845 NDUFB10O96000 172 aa23.99■■□□□ 1.43
PHF1-208ENST00000486845 KLRC3Q07444 240 aa23.99■■□□□ 1.43
PHF1-208ENST00000486845 FAAP100Q0VG06 881 aa23.99■■□□□ 1.43
PHF1-208ENST00000486845 GIMAP6Q6P9H5 292 aa23.99■■□□□ 1.43
PHF1-208ENST00000486845 ZNF467Q7Z7K2 595 aaPredicted RBP23.99■■□□□ 1.43
PHF1-208ENST00000486845 KLHDC9Q8NEP7 349 aa23.99■■□□□ 1.43
PHF1-208ENST00000486845 ZHX1Q9UKY1 873 aaPredicted RBP23.99■■□□□ 1.43
PHF1-208ENST00000486845 CTDP1Q9Y5B0 961 aaPredicted RBP23.99■■□□□ 1.43
PHF1-208ENST00000486845 EYSQ5T1H1 3165 aa23.98■■□□□ 1.43
PHF1-208ENST00000486845 ATP2A1O14983 1001 aa23.98■■□□□ 1.43
PHF1-208ENST00000486845 ZBED4O75132 1171 aa23.98■■□□□ 1.43
PHF1-208ENST00000486845 SNAI1O95863 264 aaPredicted RBP23.98■■□□□ 1.43
PHF1-208ENST00000486845 RIPK3Q9Y572 518 aa23.98■■□□□ 1.43
PHF1-208ENST00000486845 GSG1L2A8MUP6 293 aa23.97■■□□□ 1.43
PHF1-208ENST00000486845 DUSP11O75319 330 aaKnown RBP23.97■■□□□ 1.43
PHF1-208ENST00000486845 KCNA10Q16322 511 aa23.97■■□□□ 1.43
PHF1-208ENST00000486845 MROH7Q68CQ1 1323 aa23.97■■□□□ 1.43
PHF1-208ENST00000486845 MIER1Q8N108 512 aa23.97■■□□□ 1.43
PHF1-208ENST00000486845 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.96■■□□□ 1.43
PHF1-208ENST00000486845 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.96■■□□□ 1.43
PHF1-208ENST00000486845 MINDY4BA8MYZ0 360 aa23.96■■□□□ 1.43
PHF1-208ENST00000486845 CST5P28325 142 aaPredicted RBP23.96■■□□□ 1.43
PHF1-208ENST00000486845 CCSAPQ6IQ19 270 aaPredicted RBP23.96■■□□□ 1.43
PHF1-208ENST00000486845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.96■■□□□ 1.43
PHF1-208ENST00000486845 CPXCR1Q8N123 301 aa23.96■■□□□ 1.43
PHF1-208ENST00000486845 STK11IPQ8N1F8 1099 aa23.96■■□□□ 1.43
PHF1-208ENST00000486845 GLT1D1Q96MS3 346 aa23.96■■□□□ 1.43
PHF1-208ENST00000486845 ECHDC1Q9NTX5 307 aa23.96■■□□□ 1.43
PHF1-208ENST00000486845 ELP1O95163 1332 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 MYH4Q9Y623 1939 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 TIMP1P01033 207 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 SLC4A3P48751 1232 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 ACVR2BQ13705 512 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 PCSK9Q8NBP7 692 aaKnown RBP23.95■■□□□ 1.42
PHF1-208ENST00000486845 KIFC2Q96AC6 838 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 SPC25Q9HBM1 224 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 ZNF287Q9HBT7 754 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.95■■□□□ 1.42
PHF1-208ENST00000486845 CLIP2Q9UDT6 1046 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 FBXO40Q9UH90 709 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 TBX21Q9UL17 535 aa23.95■■□□□ 1.42
PHF1-208ENST00000486845 IGKV6D-41A0A0C4DH26 115 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 SMARCA5O60264 1052 aaPredicted RBP23.94■■□□□ 1.42
PHF1-208ENST00000486845 DNAJB2P25686 324 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 CCDC174Q6PII3 467 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 ANKRD35Q8N283 1001 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 KBTBD3Q8NAB2 608 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 APPBP2Q92624 585 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 ABHD16BQ9H3Z7 469 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 SLC38A10Q9HBR0 1119 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 FEM1BQ9UK73 627 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 SYNPO2Q9UMS6 1093 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 CDH23Q9H251 3354 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 PRUNE2Q8WUY3 3088 aa23.94■■□□□ 1.42
PHF1-208ENST00000486845 MYADML2A6NDP7 307 aa23.93■■□□□ 1.42
PHF1-208ENST00000486845 C6orf222P0C671 652 aaPredicted RBP23.93■■□□□ 1.42
PHF1-208ENST00000486845 MFSD5Q6N075 450 aa23.93■■□□□ 1.42
PHF1-208ENST00000486845 CHST13Q8NET6 341 aa23.93■■□□□ 1.42
PHF1-208ENST00000486845 OSBP2Q969R2 916 aa23.93■■□□□ 1.42
PHF1-208ENST00000486845 UPF3AQ9H1J1 476 aaKnown RBP23.93■■□□□ 1.42
PHF1-208ENST00000486845 RAVER2Q9HCJ3 691 aaKnown RBP23.93■■□□□ 1.42
PHF1-208ENST00000486845 VCANP13611 3396 aa23.92■■□□□ 1.42
PHF1-208ENST00000486845 GNAT2P19087 354 aa23.92■■□□□ 1.42
PHF1-208ENST00000486845 TDO2P48775 406 aa23.92■■□□□ 1.42
PHF1-208ENST00000486845 OAZ1P54368 228 aa23.92■■□□□ 1.42
PHF1-208ENST00000486845 PPIGQ13427 754 aaKnown RBP eCLIP23.92■■□□□ 1.425e-10■■■■■ 38.8
PHF1-208ENST00000486845 ZNF444Q8N0Y2 327 aaPredicted RBP23.92■■□□□ 1.42
PHF1-208ENST00000486845 SYMPKQ92797 1274 aaKnown RBP23.92■■□□□ 1.42
PHF1-208ENST00000486845 MKL1Q969V6 931 aa23.92■■□□□ 1.42
PHF1-208ENST00000486845 GPATCH3Q96I76 525 aa23.92■■□□□ 1.42
PHF1-208ENST00000486845 MCM3APO60318 1980 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 A0A0U1RQG5 324 aaPredicted RBP23.91■■□□□ 1.42
PHF1-208ENST00000486845 RNF113AO15541 343 aaKnown RBP23.91■■□□□ 1.42
PHF1-208ENST00000486845 ASGR1P07306 291 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 ZFYP08048 801 aaPredicted RBP23.91■■□□□ 1.42
PHF1-208ENST00000486845 CDK7P50613 346 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 GJA9P57773 515 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 344.1 ms