RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TMEM199Q8N511 208 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 HLA-CQ95604 372 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 MAML3Q96JK9 1138 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 MOV10L1Q9BXT6 1211 aaKnown RBP10.26□□□□□ -0.77
XRN1-212ENST00000486211 IL23AQ9NPF7 189 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 STARD7Q9NQZ5 370 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 ABCF2Q9UG63 623 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 ZNF318Q5VUA4 2279 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 MAP3K7O43318 606 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 VCAM1P19320 739 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 ADORA1P30542 326 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 CDK7P50613 346 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 ACLYP53396 1101 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 CCSAPQ6IQ19 270 aaPredicted RBP10.25□□□□□ -0.77
XRN1-212ENST00000486211 SLC4A10Q6U841 1118 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 LENG1Q96BZ8 264 aaPredicted RBP10.25□□□□□ -0.77
XRN1-212ENST00000486211 UIMC1Q96RL1 719 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 TSEN34Q9BSV6 310 aaKnown RBP10.25□□□□□ -0.77
XRN1-212ENST00000486211 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.25□□□□□ -0.77
XRN1-212ENST00000486211 NRBP1Q9UHY1 535 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 FANCIQ9NVI1 1328 aa10.25□□□□□ -0.77
XRN1-212ENST00000486211 TAL1P17542 331 aaPredicted RBP10.24□□□□□ -0.77
XRN1-212ENST00000486211 ERCC3P19447 782 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 KCNC4Q03721 635 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 ZYXQ15942 572 aaKnown RBP10.24□□□□□ -0.77
XRN1-212ENST00000486211 CCDC27Q2M243 656 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 SPTY2D1Q68D10 685 aaPredicted RBP10.24□□□□□ -0.77
XRN1-212ENST00000486211 WWC1Q8IX03 1113 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 SHCBP1Q8NEM2 672 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 KLHDC9Q8NEP7 349 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 ANKS1AQ92625 1134 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 PPP1R12CQ9BZL4 782 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 DHX36Q9H2U1 1008 aaKnown RBP10.24□□□□□ -0.77
XRN1-212ENST00000486211 TSHZ2Q9NRE2 1034 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 TSR3Q9UJK0 312 aaKnown RBP10.24□□□□□ -0.77
XRN1-212ENST00000486211 PCDHA11Q9Y5I1 949 aa10.24□□□□□ -0.77
XRN1-212ENST00000486211 MOXD2PA6NHM9 499 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 FGBP02675 491 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 ZNF865P0CJ78 1059 aaPredicted RBP10.23□□□□□ -0.77
XRN1-212ENST00000486211 CYP2C18P33260 490 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 FOXK2Q01167 660 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 TSR1Q2NL82 804 aaKnown RBP10.23□□□□□ -0.77
XRN1-212ENST00000486211 OTOP2Q7RTS6 562 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 FAM178BQ8IXR5 827 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 FAM126BQ8IXS8 530 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 TEX11Q8IYF3 940 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 ABRAQ8N0Z2 381 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 GJD3Q8N144 294 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 SH3RF3Q8TEJ3 882 aaPredicted RBP10.23□□□□□ -0.77
XRN1-212ENST00000486211 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 NSUN4Q96CB9 384 aaKnown RBP10.23□□□□□ -0.77
XRN1-212ENST00000486211 VWCEQ96DN2 955 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 SPATC1LQ9H0A9 340 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 MTIF3Q9H2K0 278 aaKnown RBP10.23□□□□□ -0.77
XRN1-212ENST00000486211 IL16Q14005 1332 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 MROH7Q68CQ1 1323 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 SYNRGQ9UMZ2 1314 aa10.23□□□□□ -0.77
XRN1-212ENST00000486211 BRWD1Q9NSI6 2320 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 MYADML2A6NDP7 307 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 APBB1O00213 710 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 GH2P01242 217 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 KCNA10Q16322 511 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 FOXP4Q8IVH2 680 aaPredicted RBP10.22□□□□□ -0.77
XRN1-212ENST00000486211 ACER1Q8TDN7 264 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 KIAA1683Q9H0B3 1180 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 RPAP3Q9H6T3 665 aaPredicted RBP10.22□□□□□ -0.77
XRN1-212ENST00000486211 SLC5A4Q9NY91 659 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 ELP1O95163 1332 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 USP34Q70CQ2 3546 aa10.22□□□□□ -0.77
XRN1-212ENST00000486211 CDK5RAP2Q96SN8 1893 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 LPXNO60711 386 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 CIAO1O76071 339 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 ARHGEF15O94989 841 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 CD4P01730 458 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 CA3P07451 260 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 LDHCP07864 332 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 ALADP13716 330 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 AKR1A1P14550 325 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 USP14P54578 494 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 EXOSC9Q06265 439 aaKnown RBP10.21□□□□□ -0.77
XRN1-212ENST00000486211 FEZ1Q99689 392 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 CERS4Q9HA82 394 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 CEP126Q9P2H0 1117 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 SLC4A7Q9Y6M7 1214 aa10.21□□□□□ -0.77
XRN1-212ENST00000486211 FLT1P17948 1338 aa10.21□□□□□ -0.78
XRN1-212ENST00000486211 UMODL1Q5DID0 1318 aa10.21□□□□□ -0.78
XRN1-212ENST00000486211 FOCADQ5VW36 1801 aa10.21□□□□□ -0.78
XRN1-212ENST00000486211 CFAP54Q96N23 3096 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 GRXCR2A6NFK2 248 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 ARVCFO00192 962 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 CST5P28325 142 aaPredicted RBP10.2□□□□□ -0.78
XRN1-212ENST00000486211 COL4A4P53420 1690 aaPredicted RBP10.2□□□□□ -0.78
XRN1-212ENST00000486211 GSTO1P78417 241 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 CSPP1Q1MSJ5 1256 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 CRACR2BQ8N4Y2 399 aaPredicted RBP10.2□□□□□ -0.78
XRN1-212ENST00000486211 TINF2Q9BSI4 451 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 USP44Q9H0E7 712 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms