RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 FCER1AP12319 257 aa20.97■□□□□ 0.95
MCF2L-226ENST00000486210 FAM227BQ96M60 508 aa20.97■□□□□ 0.95
MCF2L-226ENST00000486210 PUS7LQ9H0K6 701 aaKnown RBP20.97■□□□□ 0.95
MCF2L-226ENST00000486210 SWAP70Q9UH65 585 aa20.97■□□□□ 0.95
MCF2L-226ENST00000486210 ADAMTS5Q9UNA0 930 aa20.97■□□□□ 0.95
MCF2L-226ENST00000486210 ROBO3Q96MS0 1386 aa20.97■□□□□ 0.95
MCF2L-226ENST00000486210 A0A1W2PQ45 241 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-226ENST00000486210 A0A1W2PQY0 241 aa20.96■□□□□ 0.95
MCF2L-226ENST00000486210 ZFYP08048 801 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-226ENST00000486210 RARBP10826 455 aa20.96■□□□□ 0.95
MCF2L-226ENST00000486210 ZMYM1Q5SVZ6 1142 aa20.96■□□□□ 0.95
MCF2L-226ENST00000486210 SAMD1Q6SPF0 538 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-226ENST00000486210 APPBP2Q92624 585 aa20.96■□□□□ 0.95
MCF2L-226ENST00000486210 LENG1Q96BZ8 264 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-226ENST00000486210 ARHGEF10LQ9HCE6 1279 aa20.96■□□□□ 0.95
MCF2L-226ENST00000486210 NRBP1Q9UHY1 535 aa20.96■□□□□ 0.95
MCF2L-226ENST00000486210 MUC3AQ02505 3323 aa20.96■□□□□ 0.95
MCF2L-226ENST00000486210 M0R2C6 588 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 WDR46O15213 610 aaKnown RBP20.95■□□□□ 0.94
MCF2L-226ENST00000486210 SLC25A27O95847 323 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 ZNF865P0CJ78 1059 aaPredicted RBP20.95■□□□□ 0.94
MCF2L-226ENST00000486210 ICA1Q05084 483 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 NMIQ13287 307 aaPredicted RBP20.95■□□□□ 0.94
MCF2L-226ENST00000486210 GRIN2CQ14957 1233 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 ZNF792Q3KQV3 632 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 USP38Q8NB14 1042 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 MMP19Q99542 508 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 TINF2Q9BSI4 451 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 ARMT1Q9H993 441 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 ATP8A2Q9NTI2 1148 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 FBXO28Q9NVF7 368 aa20.95■□□□□ 0.94
MCF2L-226ENST00000486210 A0A0D9SFI3 127 aa20.94■□□□□ 0.94
MCF2L-226ENST00000486210 PRKAB2O43741 272 aa20.94■□□□□ 0.94
MCF2L-226ENST00000486210 PQBP1O60828 265 aaKnown RBP20.94■□□□□ 0.94
MCF2L-226ENST00000486210 ADAMTS4O75173 837 aa20.94■□□□□ 0.94
MCF2L-226ENST00000486210 MBD4O95243 580 aa20.94■□□□□ 0.94
MCF2L-226ENST00000486210 LRRFIP1Q32MZ4 808 aaKnown RBP20.94■□□□□ 0.94
MCF2L-226ENST00000486210 RNF180Q86T96 592 aa20.94■□□□□ 0.94
MCF2L-226ENST00000486210 SH2D4AQ9H788 454 aa20.94■□□□□ 0.94
MCF2L-226ENST00000486210 RAG1P15918 1043 aa20.93■□□□□ 0.94
MCF2L-226ENST00000486210 CHMLP26374 656 aa20.93■□□□□ 0.94
MCF2L-226ENST00000486210 FPGSQ05932 587 aa20.93■□□□□ 0.94
MCF2L-226ENST00000486210 FAAP100Q0VG06 881 aa20.93■□□□□ 0.94
MCF2L-226ENST00000486210 CCDC129Q6ZRS4 1044 aa20.93■□□□□ 0.94
MCF2L-226ENST00000486210 RIOX2Q8IUF8 465 aa20.93■□□□□ 0.94
MCF2L-226ENST00000486210 REPS2Q8NFH8 660 aa20.93■□□□□ 0.94
MCF2L-226ENST00000486210 DIS3Q9Y2L1 958 aaKnown RBP20.93■□□□□ 0.94
MCF2L-226ENST00000486210 MYH7P12883 1935 aa20.92■□□□□ 0.94
MCF2L-226ENST00000486210 CYP2D7A0A087X1C5 515 aa20.92■□□□□ 0.94
MCF2L-226ENST00000486210 DNAJB2P25686 324 aa20.92■□□□□ 0.94
MCF2L-226ENST00000486210 CWC27Q6UX04 472 aaKnown RBP20.92■□□□□ 0.94
MCF2L-226ENST00000486210 ANKRD33Q7Z3H0 272 aa20.92■□□□□ 0.94
MCF2L-226ENST00000486210 TICAM2Q86XR7 235 aa20.92■□□□□ 0.94
MCF2L-226ENST00000486210 IL25Q9H293 177 aa20.92■□□□□ 0.94
MCF2L-226ENST00000486210 DIAPH3Q9NSV4 1193 aa20.92■□□□□ 0.94
MCF2L-226ENST00000486210 TMEM39AQ9NV64 488 aa20.92■□□□□ 0.94
MCF2L-226ENST00000486210 ZNF214Q9UL59 606 aaPredicted RBP20.92■□□□□ 0.94
MCF2L-226ENST00000486210 GREB1LQ9C091 1923 aaPredicted RBP20.92■□□□□ 0.94
MCF2L-226ENST00000486210 EEF2P13639 858 aaKnown RBP20.91■□□□□ 0.94
MCF2L-226ENST00000486210 AKR1A1P14550 325 aa20.91■□□□□ 0.94
MCF2L-226ENST00000486210 CDK8P49336 464 aa20.91■□□□□ 0.94
MCF2L-226ENST00000486210 KCTD2Q14681 263 aa20.91■□□□□ 0.94
MCF2L-226ENST00000486210 SYMPKQ92797 1274 aaKnown RBP20.91■□□□□ 0.94
MCF2L-226ENST00000486210 CCDC17Q96LX7 622 aa20.91■□□□□ 0.94
MCF2L-226ENST00000486210 HELLSQ9NRZ9 838 aa20.91■□□□□ 0.94
MCF2L-226ENST00000486210 SYNRGQ9UMZ2 1314 aa20.9■□□□□ 0.94
MCF2L-226ENST00000486210 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-226ENST00000486210 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-226ENST00000486210 HIP1O00291 1037 aa20.9■□□□□ 0.94
MCF2L-226ENST00000486210 VWA5AO00534 786 aa20.9■□□□□ 0.94
MCF2L-226ENST00000486210 GPAA1O43292 621 aa20.9■□□□□ 0.94
MCF2L-226ENST00000486210 STAT3P40763 770 aa20.9■□□□□ 0.94
MCF2L-226ENST00000486210 CCSAPQ6IQ19 270 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-226ENST00000486210 ZNF589Q86UQ0 364 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-226ENST00000486210 TOX2Q96NM4 488 aa20.9■□□□□ 0.94
MCF2L-226ENST00000486210 STRBPQ96SI9 672 aaKnown RBP20.9■□□□□ 0.94
MCF2L-226ENST00000486210 PPP1R9AQ9ULJ8 1098 aa20.9■□□□□ 0.94
MCF2L-226ENST00000486210 ACLYP53396 1101 aa20.89■□□□□ 0.93
MCF2L-226ENST00000486210 IRX5P78411 483 aaPredicted RBP20.89■□□□□ 0.93
MCF2L-226ENST00000486210 MCMDC2Q4G0Z9 681 aa20.89■□□□□ 0.93
MCF2L-226ENST00000486210 C12orf60Q5U649 245 aa20.89■□□□□ 0.93
MCF2L-226ENST00000486210 C16orf86Q6ZW13 317 aa20.89■□□□□ 0.93
MCF2L-226ENST00000486210 KLHDC9Q8NEP7 349 aa20.89■□□□□ 0.93
MCF2L-226ENST00000486210 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.89■□□□□ 0.932e-6■■■□□ 16.1
MCF2L-226ENST00000486210 TSEN34Q9BSV6 310 aaKnown RBP20.89■□□□□ 0.93
MCF2L-226ENST00000486210 ZNF576Q9H609 170 aa20.89■□□□□ 0.93
MCF2L-226ENST00000486210 STARD7Q9NQZ5 370 aa20.89■□□□□ 0.93
MCF2L-226ENST00000486210 TTC28Q96AY4 2481 aa20.88■□□□□ 0.93
MCF2L-226ENST00000486210 MYADML2A6NDP7 307 aa20.88■□□□□ 0.93
MCF2L-226ENST00000486210 TJAP1Q5JTD0 557 aa20.88■□□□□ 0.93
MCF2L-226ENST00000486210 FAM83BQ5T0W9 1011 aa20.88■□□□□ 0.93
MCF2L-226ENST00000486210 TBX21Q9UL17 535 aa20.88■□□□□ 0.93
MCF2L-226ENST00000486210 SLC4A4Q9Y6R1 1079 aa20.88■□□□□ 0.93
MCF2L-226ENST00000486210 MCM3APO60318 1980 aa20.88■□□□□ 0.93
MCF2L-226ENST00000486210 USP17L12C9JPN9 530 aa20.87■□□□□ 0.93
MCF2L-226ENST00000486210 USP17L21D6R901 530 aa20.87■□□□□ 0.93
MCF2L-226ENST00000486210 CDC45O75419 566 aa20.87■□□□□ 0.93
MCF2L-226ENST00000486210 SNAI1O95863 264 aaPredicted RBP20.87■□□□□ 0.93
MCF2L-226ENST00000486210 TIMP1P01033 207 aa20.87■□□□□ 0.93
MCF2L-226ENST00000486210 KCNA10Q16322 511 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms