RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 DNAJB2P25686 324 aa19.4■□□□□ 0.7
PDE6D-205ENST00000486044 SLFNL1Q499Z3 407 aa19.4■□□□□ 0.7
PDE6D-205ENST00000486044 CTR9Q6PD62 1173 aa19.4■□□□□ 0.7
PDE6D-205ENST00000486044 REPS2Q8NFH8 660 aa19.4■□□□□ 0.7
PDE6D-205ENST00000486044 GLT1D1Q96MS3 346 aa19.4■□□□□ 0.7
PDE6D-205ENST00000486044 SPC25Q9HBM1 224 aa19.4■□□□□ 0.7
PDE6D-205ENST00000486044 ARPP21Q9UBL0 812 aaPredicted RBP19.4■□□□□ 0.7
PDE6D-205ENST00000486044 CTDP1Q9Y5B0 961 aaPredicted RBP19.4■□□□□ 0.7
PDE6D-205ENST00000486044 SYNRGQ9UMZ2 1314 aa19.4■□□□□ 0.7
PDE6D-205ENST00000486044 SMIM22K7EJ46 135 aa19.39■□□□□ 0.69
PDE6D-205ENST00000486044 DUSP11O75319 330 aaKnown RBP19.39■□□□□ 0.69
PDE6D-205ENST00000486044 TIMP1P01033 207 aa19.39■□□□□ 0.69
PDE6D-205ENST00000486044 KCNA10Q16322 511 aa19.39■□□□□ 0.69
PDE6D-205ENST00000486044 SNRNP48Q6IEG0 339 aaKnown RBP19.39■□□□□ 0.69
PDE6D-205ENST00000486044 MAMDC4Q6UXC1 1216 aa19.39■□□□□ 0.69
PDE6D-205ENST00000486044 PRPF38AQ8NAV1 312 aaKnown RBP19.39■□□□□ 0.69
PDE6D-205ENST00000486044 PCSK9Q8NBP7 692 aaKnown RBP19.39■□□□□ 0.69
PDE6D-205ENST00000486044 KLHDC9Q8NEP7 349 aa19.39■□□□□ 0.69
PDE6D-205ENST00000486044 LENG1Q96BZ8 264 aaPredicted RBP19.39■□□□□ 0.69
PDE6D-205ENST00000486044 PRDM6Q9NQX0 595 aa19.39■□□□□ 0.69
PDE6D-205ENST00000486044 ELP1O95163 1332 aa19.39■□□□□ 0.69
PDE6D-205ENST00000486044 SNAI1O95863 264 aaPredicted RBP19.38■□□□□ 0.69
PDE6D-205ENST00000486044 VCANP13611 3396 aa19.38■□□□□ 0.69
PDE6D-205ENST00000486044 GRIN2CQ14957 1233 aa19.38■□□□□ 0.69
PDE6D-205ENST00000486044 ZBED9Q6R2W3 1325 aa19.38■□□□□ 0.69
PDE6D-205ENST00000486044 ZNF467Q7Z7K2 595 aaPredicted RBP19.38■□□□□ 0.69
PDE6D-205ENST00000486044 PRUNE2Q8WUY3 3088 aa19.38■□□□□ 0.69
PDE6D-205ENST00000486044 VTI1AQ96AJ9 217 aa19.38■□□□□ 0.69
PDE6D-205ENST00000486044 CHMP4BQ9H444 224 aaKnown RBP19.38■□□□□ 0.69
PDE6D-205ENST00000486044 ZNF576Q9H609 170 aa19.38■□□□□ 0.69
PDE6D-205ENST00000486044 MKNK2Q9HBH9 465 aa19.38■□□□□ 0.69
PDE6D-205ENST00000486044 ZHX1Q9UKY1 873 aaPredicted RBP19.38■□□□□ 0.69
PDE6D-205ENST00000486044 DDX19BQ9UMR2 479 aa19.38■□□□□ 0.69
PDE6D-205ENST00000486044 DNAJC25-GNG10A0A024R161 153 aa19.37■□□□□ 0.69
PDE6D-205ENST00000486044 F5H6K3 240 aa19.37■□□□□ 0.69
PDE6D-205ENST00000486044 ATP2A1O14983 1001 aa19.37■□□□□ 0.69
PDE6D-205ENST00000486044 ZBED4O75132 1171 aa19.37■□□□□ 0.69
PDE6D-205ENST00000486044 KLRC3Q07444 240 aa19.37■□□□□ 0.69
PDE6D-205ENST00000486044 PPIGQ13427 754 aaKnown RBP eCLIP19.37■□□□□ 0.69
PDE6D-205ENST00000486044 MFSD5Q6N075 450 aa19.37■□□□□ 0.69
PDE6D-205ENST00000486044 TIFAQ96CG3 184 aa19.37■□□□□ 0.69
PDE6D-205ENST00000486044 NYAP2Q9P242 653 aa19.37■□□□□ 0.69
PDE6D-205ENST00000486044 C6orf222P0C671 652 aaPredicted RBP19.36■□□□□ 0.69
PDE6D-205ENST00000486044 CST5P28325 142 aaPredicted RBP19.36■□□□□ 0.69
PDE6D-205ENST00000486044 SLC4A3P48751 1232 aa19.36■□□□□ 0.69
PDE6D-205ENST00000486044 ACVR2BQ13705 512 aa19.36■□□□□ 0.69
PDE6D-205ENST00000486044 TJAP1Q5JTD0 557 aa19.36■□□□□ 0.69
PDE6D-205ENST00000486044 CCSAPQ6IQ19 270 aaPredicted RBP19.36■□□□□ 0.69
PDE6D-205ENST00000486044 CPXCR1Q8N123 301 aa19.36■□□□□ 0.69
PDE6D-205ENST00000486044 NUP88Q99567 741 aaPredicted RBP19.36■□□□□ 0.69
PDE6D-205ENST00000486044 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.36■□□□□ 0.69
PDE6D-205ENST00000486044 ABHD16BQ9H3Z7 469 aa19.36■□□□□ 0.69
PDE6D-205ENST00000486044 FBXO40Q9UH90 709 aa19.36■□□□□ 0.69
PDE6D-205ENST00000486044 TBX21Q9UL17 535 aa19.36■□□□□ 0.69
PDE6D-205ENST00000486044 SBK1Q52WX2 424 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 GIMAP6Q6P9H5 292 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 SIRT2Q8IXJ6 389 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 ANKRD35Q8N283 1001 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 TMEM199Q8N511 208 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDE6D-205ENST00000486044 PUS7LQ9H0K6 701 aaKnown RBP19.35■□□□□ 0.69
PDE6D-205ENST00000486044 ZNF287Q9HBT7 754 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 ZBTB40Q9NUA8 1239 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 RIPK3Q9Y572 518 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 CDH23Q9H251 3354 aa19.35■□□□□ 0.69
PDE6D-205ENST00000486044 MYH7P12883 1935 aa19.34■□□□□ 0.69
PDE6D-205ENST00000486044 TLR3O15455 904 aaKnown RBP19.34■□□□□ 0.69
PDE6D-205ENST00000486044 NDUFB10O96000 172 aa19.34■□□□□ 0.69
PDE6D-205ENST00000486044 ASGR1P07306 291 aa19.34■□□□□ 0.69
PDE6D-205ENST00000486044 RASA1P20936 1047 aa19.34■□□□□ 0.69
PDE6D-205ENST00000486044 CDK7P50613 346 aa19.34■□□□□ 0.69
PDE6D-205ENST00000486044 GNASQ5JWF2 1037 aa19.34■□□□□ 0.69
PDE6D-205ENST00000486044 CCDC129Q6ZRS4 1044 aa19.34■□□□□ 0.69
PDE6D-205ENST00000486044 GAS2L1Q99501 681 aaPredicted RBP19.34■□□□□ 0.69
PDE6D-205ENST00000486044 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
PDE6D-205ENST00000486044 A0A0U1RQG5 324 aaPredicted RBP19.33■□□□□ 0.68
PDE6D-205ENST00000486044 ARVCFO00192 962 aa19.33■□□□□ 0.68
PDE6D-205ENST00000486044 CHGBP05060 677 aa19.33■□□□□ 0.68
PDE6D-205ENST00000486044 CCDC144BQ3MJ40 725 aa19.33■□□□□ 0.68
PDE6D-205ENST00000486044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.33■□□□□ 0.68
PDE6D-205ENST00000486044 ZNF444Q8N0Y2 327 aaPredicted RBP19.33■□□□□ 0.68
PDE6D-205ENST00000486044 CHST13Q8NET6 341 aa19.33■□□□□ 0.68
PDE6D-205ENST00000486044 KIFC2Q96AC6 838 aa19.33■□□□□ 0.68
PDE6D-205ENST00000486044 STRBPQ96SI9 672 aaKnown RBP19.33■□□□□ 0.68
PDE6D-205ENST00000486044 CLIP2Q9UDT6 1046 aa19.33■□□□□ 0.68
PDE6D-205ENST00000486044 FEM1BQ9UK73 627 aa19.33■□□□□ 0.68
PDE6D-205ENST00000486044 MYADML2A6NDP7 307 aa19.32■□□□□ 0.68
PDE6D-205ENST00000486044 MINDY4BA8MYZ0 360 aa19.32■□□□□ 0.68
PDE6D-205ENST00000486044 OAZ1P54368 228 aa19.32■□□□□ 0.68
PDE6D-205ENST00000486044 GJA9P57773 515 aa19.32■□□□□ 0.68
PDE6D-205ENST00000486044 PSRC1Q6PGN9 363 aaPredicted RBP19.32■□□□□ 0.68
PDE6D-205ENST00000486044 LRRCC1Q9C099 1032 aa19.32■□□□□ 0.68
PDE6D-205ENST00000486044 UPF3AQ9H1J1 476 aaKnown RBP19.32■□□□□ 0.68
PDE6D-205ENST00000486044 SLC38A10Q9HBR0 1119 aa19.32■□□□□ 0.68
PDE6D-205ENST00000486044 RAVER2Q9HCJ3 691 aaKnown RBP19.32■□□□□ 0.68
PDE6D-205ENST00000486044 SYNPO2Q9UMS6 1093 aa19.32■□□□□ 0.68
PDE6D-205ENST00000486044 COG6Q9Y2V7 657 aa19.32■□□□□ 0.68
PDE6D-205ENST00000486044 FDX1P10109 184 aa19.31■□□□□ 0.68
PDE6D-205ENST00000486044 CSF2RAP15509 400 aa19.31■□□□□ 0.68
PDE6D-205ENST00000486044 TMEM240Q5SV17 173 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms