RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 TMEM240Q5SV17 173 aa13.89□□□□□ -0.19
MDH1-213ENST00000485781 PSRC1Q6PGN9 363 aaPredicted RBP13.89□□□□□ -0.19
MDH1-213ENST00000485781 FTSJ3Q8IY81 847 aaKnown RBP13.89□□□□□ -0.19
MDH1-213ENST00000485781 PCSK9Q8NBP7 692 aaKnown RBP13.89□□□□□ -0.19
MDH1-213ENST00000485781 DNAJC2Q99543 621 aaKnown RBP13.89□□□□□ -0.19
MDH1-213ENST00000485781 PPP1R12CQ9BZL4 782 aa13.89□□□□□ -0.19
MDH1-213ENST00000485781 MTIF3Q9H2K0 278 aaKnown RBP13.89□□□□□ -0.19
MDH1-213ENST00000485781 FBXO28Q9NVF7 368 aa13.89□□□□□ -0.19
MDH1-213ENST00000485781 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
MDH1-213ENST00000485781 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
MDH1-213ENST00000485781 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
MDH1-213ENST00000485781 MYH8P13535 1937 aa13.89□□□□□ -0.19
MDH1-213ENST00000485781 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
MDH1-213ENST00000485781 C6orf222P0C671 652 aaPredicted RBP13.88□□□□□ -0.19
MDH1-213ENST00000485781 ACRP10323 421 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 SLC4A3P48751 1232 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 SIAH1Q8IUQ4 282 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 ITPRIPQ8IWB1 547 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 LCORLQ8N3X6 602 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 MSL3Q8N5Y2 521 aaKnown RBP13.88□□□□□ -0.19
MDH1-213ENST00000485781 KLHDC9Q8NEP7 349 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 FAM122AQ96E09 287 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 TSPYL2Q9H2G4 693 aaPredicted RBP13.88□□□□□ -0.19
MDH1-213ENST00000485781 PPP1R9AQ9ULJ8 1098 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 ADAMTS5Q9UNA0 930 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 ELP1O95163 1332 aa13.88□□□□□ -0.19
MDH1-213ENST00000485781 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
MDH1-213ENST00000485781 A0A0U1RQG5 324 aaPredicted RBP13.87□□□□□ -0.19
MDH1-213ENST00000485781 GOLIM4O00461 696 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 DUSP11O75319 330 aaKnown RBP13.87□□□□□ -0.19
MDH1-213ENST00000485781 EEF2P13639 858 aaKnown RBP13.87□□□□□ -0.19
MDH1-213ENST00000485781 CSF2RAP15509 400 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 CDK8P49336 464 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 FAM83BQ5T0W9 1011 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 ZNF365Q70YC5 407 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 ARMT1Q9H993 441 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 KANSL2Q9H9L4 492 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 SLC28A3Q9HAS3 691 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 ATP8A2Q9NTI2 1148 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 ZNF214Q9UL59 606 aaPredicted RBP13.87□□□□□ -0.19
MDH1-213ENST00000485781 EXOC6BQ9Y2D4 811 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 SYNGAP1Q96PV0 1343 aa13.87□□□□□ -0.19
MDH1-213ENST00000485781 ARVCFO00192 962 aa13.86□□□□□ -0.19
MDH1-213ENST00000485781 ASGR1P07306 291 aa13.86□□□□□ -0.19
MDH1-213ENST00000485781 PLA2G5P39877 138 aa13.86□□□□□ -0.19
MDH1-213ENST00000485781 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
MDH1-213ENST00000485781 C16orf59Q7L2K0 433 aa13.86□□□□□ -0.19
MDH1-213ENST00000485781 TEX13BQ9BXU2 312 aa13.86□□□□□ -0.19
MDH1-213ENST00000485781 BCL11AQ9H165 835 aa13.86□□□□□ -0.19
MDH1-213ENST00000485781 IL1RAPL2Q9NP60 686 aa13.86□□□□□ -0.19
MDH1-213ENST00000485781 PARP14Q460N5 1801 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 MYADML2A6NDP7 307 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 MBD4O95243 580 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 SNAI1O95863 264 aaPredicted RBP13.85□□□□□ -0.19
MDH1-213ENST00000485781 CST5P28325 142 aaPredicted RBP13.85□□□□□ -0.19
MDH1-213ENST00000485781 CDK7P50613 346 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 ACVR2BQ13705 512 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 HSP90AB4PQ58FF6 505 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 MICALL1Q8N3F8 863 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 SLF1Q9BQI6 1058 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 NKX2-4Q9H2Z4 354 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 IL23AQ9NPF7 189 aa13.85□□□□□ -0.19
MDH1-213ENST00000485781 CYP2D7A0A087X1C5 515 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 USP17L12C9JPN9 530 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 USP17L21D6R901 530 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 PRKAB2O43741 272 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 FGBP02675 491 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 CYP2C18P33260 490 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 ADGRE1Q14246 886 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 C12orf60Q5U649 245 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 RASIP1Q5U651 963 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 CCSAPQ6IQ19 270 aaPredicted RBP13.84□□□□□ -0.19
MDH1-213ENST00000485781 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 C16orf86Q6ZW13 317 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
MDH1-213ENST00000485781 CPXCR1Q8N123 301 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 CLASRPQ8N2M8 674 aaKnown RBP13.84□□□□□ -0.19
MDH1-213ENST00000485781 REPS2Q8NFH8 660 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 ABHD16BQ9H3Z7 469 aa13.84□□□□□ -0.19
MDH1-213ENST00000485781 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.84□□□□□ -0.19
MDH1-213ENST00000485781 TCRBV5S4A2TA0A5A2 114 aa13.83□□□□□ -0.2
MDH1-213ENST00000485781 ZBED4O75132 1171 aa13.83□□□□□ -0.2
MDH1-213ENST00000485781 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.2
MDH1-213ENST00000485781 GJA9P57773 515 aa13.83□□□□□ -0.2
MDH1-213ENST00000485781 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
MDH1-213ENST00000485781 SKIV2LQ15477 1246 aaKnown RBP13.83□□□□□ -0.2
MDH1-213ENST00000485781 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.2
MDH1-213ENST00000485781 CEP85Q6P2H3 762 aa13.83□□□□□ -0.2
MDH1-213ENST00000485781 ZNF467Q7Z7K2 595 aaPredicted RBP13.83□□□□□ -0.2
MDH1-213ENST00000485781 FAM126BQ8IXS8 530 aa13.83□□□□□ -0.2
MDH1-213ENST00000485781 ANKRD35Q8N283 1001 aa13.83□□□□□ -0.2
MDH1-213ENST00000485781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.83□□□□□ -0.2
MDH1-213ENST00000485781 HERVK_113Q902F9 699 aa13.83□□□□□ -0.2
MDH1-213ENST00000485781 NUP88Q99567 741 aaPredicted RBP13.83□□□□□ -0.2
MDH1-213ENST00000485781 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.83□□□□□ -0.2
MDH1-213ENST00000485781 BAZ2AQ9UIF9 1905 aaKnown RBP13.82□□□□□ -0.2
MDH1-213ENST00000485781 DNAJC25-GNG10A0A024R161 153 aa13.82□□□□□ -0.2
MDH1-213ENST00000485781 AAK1Q2M2I8 961 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms