RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 RASGRP2Q7LDG7 609 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 SPICE1Q8N0Z3 855 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 SH3TC2Q8TF17 1288 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 GTF3C2Q8WUA4 911 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 ZNF333Q96JL9 665 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 MAP3K14Q99558 947 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 KAT14Q9H8E8 782 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 BIN2Q9UBW5 565 aaPredicted RBP10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 ADAMTS5Q9UNA0 930 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 CYP46A1Q9Y6A2 500 aa10.91□□□□□ -0.66
SHROOM3-207ENST00000485780 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 TNPO2O14787 897 aaKnown RBP10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 BMP3P12645 472 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 CPA1P15085 419 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 CTGFP29279 349 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 SLC1A4P43007 532 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 FAM110CQ1W6H9 321 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 GPATCH4Q5T3I0 446 aaKnown RBP10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 APOA5Q6Q788 366 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 ZNF654Q8IZM8 581 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 ANKRD13CQ8N6S4 541 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 TCEANC2Q96MN5 208 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 NUP88Q99567 741 aaPredicted RBP10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 LRRC2Q9BYS8 371 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 UPF3BQ9BZI7 483 aaKnown RBP10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 UPF2Q9HAU5 1272 aaKnown RBP10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 PPP1R9AQ9ULJ8 1098 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 ZNF236Q9UL36 1845 aa10.9□□□□□ -0.66
SHROOM3-207ENST00000485780 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 GRK4P32298 578 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 DSG3P32926 999 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 STAT2P52630 851 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 HERVK_113P62684 666 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 PRKCZQ05513 592 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 TOB2Q14106 344 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 COG2Q14746 738 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 GRM4Q14833 912 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 ASPRV1Q53RT3 343 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 Q6ZUG5 572 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 FAM160B2Q86V87 743 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 MB21D1Q8N884 522 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 COA7Q96BR5 231 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 SLF1Q9BQI6 1058 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 TANGO6Q9C0B7 1094 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 MORF4L1Q9UBU8 362 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 FEM1BQ9UK73 627 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 RBBP6Q7Z6E9 1792 aaKnown RBP10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 BRCA2P51587 3418 aa10.89□□□□□ -0.67
SHROOM3-207ENST00000485780 PALM3A6NDB9 673 aaPredicted RBP10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 SMCHD1A6NHR9 2005 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 CNMDO75829 334 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 FLOT1O75955 427 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 CALM1P0DP23 149 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 CALM2P0DP24 149 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 CALM3P0DP25 149 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 FDX1P10109 184 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 UBXN2AP68543 259 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 KCTD1Q719H9 257 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 CATIPQ7Z7H3 387 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 P2RX7Q99572 595 aaKnown RBP10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 FBXO28Q9NVF7 368 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 HOXC10Q9NYD6 342 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 MAD2L2Q9UI95 211 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
SHROOM3-207ENST00000485780 BAZ2BQ9UIF8 2168 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 CCDC69A6NI79 296 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 TMEM232C9JQI7 657 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 VWA5AO00534 786 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 PARP1P09874 1014 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 EN2P19622 333 aaPredicted RBP10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 FLT3LGP49771 235 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 CCAR1Q8IX12 1150 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 PRPF38AQ8NAV1 312 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 CHURC1Q8WUH1 139 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 BRF1Q92994 677 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 ATG4CQ96DT6 458 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 MTMR8Q96EF0 704 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 CWC22Q9HCG8 908 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 TXNRD2Q9NNW7 524 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 PDRG1Q9NUG6 133 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 RBPJLQ9UBG7 517 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 GABRQQ9UN88 632 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 SLC12A7Q9Y666 1083 aa10.87□□□□□ -0.67
SHROOM3-207ENST00000485780 FRMPD2Q68DX3 1309 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 MKI67P46013 3256 aaKnown RBP10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 KLF18A0A0U1RQI7 1052 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 RAD21O60216 631 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 ADCY3O60266 1144 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 OAZ1P54368 228 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 APOBRQ0VD83 1088 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 PPP2R5BQ15173 497 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms