RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 LGR5O75473 907 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 ARHGEF15O94989 841 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 TBC1D8O95759 1140 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 SLC3A2P08195 630 aaKnown RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 FDPSP14324 419 aaKnown RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 PFKFB1P16118 471 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 CDK11BP21127 795 aaKnown RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 CTBSQ01459 385 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 MYL5Q02045 173 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 PTPN12Q05209 780 aaKnown RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 RAD51AP2Q09MP3 1159 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 FAM69CQ0P6D2 419 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 APOBRQ0VD83 1088 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 NEXNQ0ZGT2 675 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 TBX2Q13207 712 aaPredicted RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 GPS2Q13227 327 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 STK38Q15208 465 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 TEAD4Q15561 434 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 ZRSR1Q15695 479 aaKnown RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 EPHA10Q5JZY3 1008 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 SH3PXD2AQ5TCZ1 1133 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 CC2D1AQ6P1N0 951 aaPredicted RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 LRP10Q7Z4F1 713 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 NLRP8Q86W28 1048 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 SIX5Q8N196 739 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 MNS1Q8NEH6 495 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 FBXO18Q8NFZ0 1043 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 IPO4Q8TEX9 1081 aaKnown RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 RABGGTAQ92696 567 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 EXOC4Q96A65 974 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 KLRG1Q96E93 195 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 ZIC5Q96T25 663 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 HINFPQ9BQA5 517 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 SDF4Q9BRK5 362 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 METTL22Q9BUU2 404 aaPredicted RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 MRFAP1Q9Y605 127 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 EID1Q9Y6B2 187 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 CPDO75976 1380 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 KDM6AO15550 1401 aaPredicted RBP5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 ATRNO75882 1429 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 NUP188Q5SRE5 1749 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 TRPM3Q9HCF6 1732 aaPredicted RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 NWD2Q9ULI1 1742 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 RGPD2P0DJD1 1756 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 SCN11AQ9UI33 1791 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 A0A087WWV3 80 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 A0A1B0GVL5 298 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 CCDC151A5D8V7 595 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 ERICH4A6NGS2 130 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 MAP2K7O14733 419 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 DHX16O60231 1041 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 PPP1R12BO60237 982 aaPredicted RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 PPP6R2O75170 966 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 RPS6KA5O75582 802 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 SASH3O75995 380 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 ZNF202O95125 648 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 CD33P20138 364 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 RFX1P22670 979 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 OAS2P29728 719 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 IRS1P35568 1242 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 CASP7P55210 303 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 SEC13P55735 322 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 HNRNPH2P55795 449 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 PSMA6P60900 246 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 TUBB4BP68371 445 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 KIF23Q02241 960 aaPredicted RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 CEBPZQ03701 1054 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 TFCP2Q12800 502 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 TUBB2AQ13885 445 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 MLECQ14165 292 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 SLC39A14Q15043 492 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 BRD3Q15059 726 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 CRTC2Q53ET0 693 aaPredicted RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 C1orf141Q5JVX7 400 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 ANO1Q5XXA6 986 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 LRRC69Q6ZNQ3 347 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 CCDC129Q6ZRS4 1044 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 MB21D2Q8IYB1 491 aaPredicted RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 ABTB2Q8N961 1025 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 JMYQ8N9B5 988 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 HNRNPLLQ8WVV9 542 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 EDC3Q96F86 508 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 LTV1Q96GA3 475 aaPredicted RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 C8orf76Q96K31 380 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 SEC62Q99442 399 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 DBNDD2Q9BQY9 259 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 TUBB2BQ9BVA1 445 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 SIL1Q9H173 461 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 VRTNQ9H8Y1 702 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 FEZ2Q9UHY8 353 aaPredicted RBP5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 PPP2R2CQ9Y2T4 447 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 HCN4Q9Y3Q4 1203 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 CLIC4Q9Y696 253 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 MAST3O60307 1309 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 NID2Q14112 1375 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 BCL9LQ86UU0 1499 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 PKD1L3Q7Z443 1732 aa5.37□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L15C9J2P7 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L10C9JJH3 530 aa5.36□□□□□ -1.55
SMARCC1-206ENST00000485737 USP17L13C9JLJ4 530 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms