RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 EVI5LQ96CN4 794 aa30.55■■■□□ 2.48
HLA-F-227ENST00000485513 UBE2OQ9C0C9 1292 aaKnown RBP30.55■■■□□ 2.48
HLA-F-227ENST00000485513 FEM1BQ9UK73 627 aa30.55■■■□□ 2.48
HLA-F-227ENST00000485513 SMCHD1A6NHR9 2005 aa30.54■■■□□ 2.48
HLA-F-227ENST00000485513 ATP2A1O14983 1001 aa30.54■■■□□ 2.48
HLA-F-227ENST00000485513 MYCNP04198 464 aaPredicted RBP30.54■■■□□ 2.48
HLA-F-227ENST00000485513 PDE1AP54750 535 aa30.54■■■□□ 2.48
HLA-F-227ENST00000485513 LRCH3Q96II8 777 aa30.54■■■□□ 2.48
HLA-F-227ENST00000485513 RIPK3Q9Y572 518 aa30.54■■■□□ 2.48
HLA-F-227ENST00000485513 LAMA3Q16787 3333 aa30.53■■■□□ 2.48
HLA-F-227ENST00000485513 FOXP2O15409 715 aa30.53■■■□□ 2.48
HLA-F-227ENST00000485513 SLC4A3P48751 1232 aa30.53■■■□□ 2.48
HLA-F-227ENST00000485513 SLFN13Q68D06 897 aa30.53■■■□□ 2.48
HLA-F-227ENST00000485513 CPXCR1Q8N123 301 aa30.53■■■□□ 2.48
HLA-F-227ENST00000485513 LRRC41Q15345 812 aa30.52■■■□□ 2.48
HLA-F-227ENST00000485513 TDHQ8IZJ6 230 aa30.52■■■□□ 2.48
HLA-F-227ENST00000485513 DDX11Q96FC9 970 aa30.52■■■□□ 2.48
HLA-F-227ENST00000485513 SLC38A10Q9HBR0 1119 aa30.52■■■□□ 2.48
HLA-F-227ENST00000485513 BMP3P12645 472 aa30.51■■■□□ 2.47
HLA-F-227ENST00000485513 RTP1P59025 263 aa30.51■■■□□ 2.47
HLA-F-227ENST00000485513 MDM2Q00987 491 aaPredicted RBP30.51■■■□□ 2.47
HLA-F-227ENST00000485513 YTHDC1Q96MU7 727 aaKnown RBP30.51■■■□□ 2.47
HLA-F-227ENST00000485513 RAVER2Q9HCJ3 691 aaKnown RBP30.51■■■□□ 2.47
HLA-F-227ENST00000485513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.51■■■□□ 2.47
HLA-F-227ENST00000485513 RARBP10826 455 aa30.5■■■□□ 2.47
HLA-F-227ENST00000485513 TAL1P17542 331 aaPredicted RBP30.5■■■□□ 2.47
HLA-F-227ENST00000485513 CTDSPL2Q05D32 466 aa30.5■■■□□ 2.47
HLA-F-227ENST00000485513 PPP4R3BQ5MIZ7 849 aa30.5■■■□□ 2.47
HLA-F-227ENST00000485513 SLC39A5Q6ZMH5 540 aa30.5■■■□□ 2.47
HLA-F-227ENST00000485513 XPNPEP3Q9NQH7 507 aa30.5■■■□□ 2.47
HLA-F-227ENST00000485513 ISY1Q9ULR0 285 aaKnown RBP30.5■■■□□ 2.47
HLA-F-227ENST00000485513 TSPY2A6NKD2 308 aa30.49■■■□□ 2.47
HLA-F-227ENST00000485513 VPS53Q5VIR6 699 aa30.49■■■□□ 2.47
HLA-F-227ENST00000485513 MSL3Q8N5Y2 521 aaKnown RBP30.49■■■□□ 2.47
HLA-F-227ENST00000485513 HELLSQ9NRZ9 838 aa30.49■■■□□ 2.47
HLA-F-227ENST00000485513 CNPY2Q9Y2B0 182 aa30.49■■■□□ 2.47
HLA-F-227ENST00000485513 ATP11BQ9Y2G3 1177 aa30.49■■■□□ 2.47
HLA-F-227ENST00000485513 DNAJC25-GNG10A0A024R161 153 aa30.48■■■□□ 2.47
HLA-F-227ENST00000485513 ADCYAP1R1P41586 468 aa30.48■■■□□ 2.47
HLA-F-227ENST00000485513 OAZ1P54368 228 aa30.48■■■□□ 2.47
HLA-F-227ENST00000485513 AAMPQ13685 434 aa30.48■■■□□ 2.47
HLA-F-227ENST00000485513 LRIT3Q3SXY7 679 aa30.48■■■□□ 2.47
HLA-F-227ENST00000485513 LBHD1Q9BQE6 289 aaPredicted RBP30.48■■■□□ 2.47
HLA-F-227ENST00000485513 INCENPQ9NQS7 918 aa30.48■■■□□ 2.47
HLA-F-227ENST00000485513 PRKAG2Q9UGJ0 569 aa30.48■■■□□ 2.47
HLA-F-227ENST00000485513 TMEM232C9JQI7 657 aa30.47■■■□□ 2.47
HLA-F-227ENST00000485513 ZNF865P0CJ78 1059 aaPredicted RBP30.47■■■□□ 2.47
HLA-F-227ENST00000485513 FDX1P10109 184 aa30.47■■■□□ 2.47
HLA-F-227ENST00000485513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.47■■■□□ 2.47
HLA-F-227ENST00000485513 GMCL1Q96IK5 515 aa30.47■■■□□ 2.47
HLA-F-227ENST00000485513 FBXO40Q9UH90 709 aa30.47■■■□□ 2.47
HLA-F-227ENST00000485513 ANAPC4Q9UJX5 808 aa30.47■■■□□ 2.47
HLA-F-227ENST00000485513 STX8Q9UNK0 236 aa30.47■■■□□ 2.47
HLA-F-227ENST00000485513 SYNGAP1Q96PV0 1343 aa30.47■■■□□ 2.47
HLA-F-227ENST00000485513 AKR1A1P14550 325 aa30.46■■■□□ 2.47
HLA-F-227ENST00000485513 SLC1A4P43007 532 aa30.46■■■□□ 2.47
HLA-F-227ENST00000485513 STAT2P52630 851 aa30.46■■■□□ 2.47
HLA-F-227ENST00000485513 ALX1Q15699 326 aa30.46■■■□□ 2.47
HLA-F-227ENST00000485513 CHST13Q8NET6 341 aa30.46■■■□□ 2.47
HLA-F-227ENST00000485513 FERMT2Q96AC1 680 aa30.46■■■□□ 2.47
HLA-F-227ENST00000485513 LNPKQ9C0E8 428 aa30.46■■■□□ 2.47
HLA-F-227ENST00000485513 IKQ13123 557 aaPredicted RBP30.45■■■□□ 2.47
HLA-F-227ENST00000485513 SNX17Q15036 470 aa30.45■■■□□ 2.47
HLA-F-227ENST00000485513 RNF180Q86T96 592 aa30.45■■■□□ 2.47
HLA-F-227ENST00000485513 FAM160B2Q86V87 743 aa30.45■■■□□ 2.47
HLA-F-227ENST00000485513 TICAM2Q86XR7 235 aa30.45■■■□□ 2.47
HLA-F-227ENST00000485513 ANKRD35Q8N283 1001 aa30.45■■■□□ 2.47
HLA-F-227ENST00000485513 CHURC1Q8WUH1 139 aa30.45■■■□□ 2.47
HLA-F-227ENST00000485513 FAM227BQ96M60 508 aa30.45■■■□□ 2.47
HLA-F-227ENST00000485513 IL17RBQ9NRM6 502 aa30.45■■■□□ 2.47
HLA-F-227ENST00000485513 RANBP6O60518 1105 aaKnown RBP30.44■■■□□ 2.46
HLA-F-227ENST00000485513 PGK1P00558 417 aa30.44■■■□□ 2.46
HLA-F-227ENST00000485513 MCCP23508 829 aa30.44■■■□□ 2.46
HLA-F-227ENST00000485513 MCMDC2Q4G0Z9 681 aa30.44■■■□□ 2.46
HLA-F-227ENST00000485513 MAMDC4Q6UXC1 1216 aa30.44■■■□□ 2.46
HLA-F-227ENST00000485513 ZNF467Q7Z7K2 595 aaPredicted RBP30.44■■■□□ 2.46
HLA-F-227ENST00000485513 STAG1Q8WVM7 1258 aa30.44■■■□□ 2.46
HLA-F-227ENST00000485513 CHMP4CQ96CF2 233 aa30.44■■■□□ 2.46
HLA-F-227ENST00000485513 PHF24Q9UPV7 400 aa30.44■■■□□ 2.46
HLA-F-227ENST00000485513 TACC3Q9Y6A5 838 aa30.44■■■□□ 2.46
HLA-F-227ENST00000485513 A0A0D9SFI3 127 aa30.43■■■□□ 2.46
HLA-F-227ENST00000485513 NMT2O60551 498 aa30.43■■■□□ 2.46
HLA-F-227ENST00000485513 SNAI1O95863 264 aaPredicted RBP30.43■■■□□ 2.46
HLA-F-227ENST00000485513 TRIM60Q495X7 471 aa30.43■■■□□ 2.46
HLA-F-227ENST00000485513 GPR153Q6NV75 609 aa30.43■■■□□ 2.46
HLA-F-227ENST00000485513 RWDD1Q9H446 243 aaPredicted RBP30.43■■■□□ 2.46
HLA-F-227ENST00000485513 ORC4O43929 436 aa30.42■■■□□ 2.46
HLA-F-227ENST00000485513 SMC5Q8IY18 1101 aa30.42■■■□□ 2.46
HLA-F-227ENST00000485513 LENG1Q96BZ8 264 aaPredicted RBP30.42■■■□□ 2.46
HLA-F-227ENST00000485513 HOMER2Q9NSB8 354 aa30.42■■■□□ 2.46
HLA-F-227ENST00000485513 FAM184BQ9ULE4 1060 aa30.42■■■□□ 2.46
HLA-F-227ENST00000485513 TRIM6-TRIM34B2RNG4 842 aa30.41■■■□□ 2.46
HLA-F-227ENST00000485513 FGAP02671 866 aa30.41■■■□□ 2.46
HLA-F-227ENST00000485513 C1orf53Q5VUE5 145 aa30.41■■■□□ 2.46
HLA-F-227ENST00000485513 ZHX1Q9UKY1 873 aaPredicted RBP30.41■■■□□ 2.46
HLA-F-227ENST00000485513 LTBP2Q14767 1821 aa30.4■■■□□ 2.46
HLA-F-227ENST00000485513 PLA2G6O60733 806 aa30.4■■■□□ 2.46
HLA-F-227ENST00000485513 FGRP09769 529 aa30.4■■■□□ 2.46
HLA-F-227ENST00000485513 NMIQ13287 307 aaPredicted RBP30.4■■■□□ 2.46
HLA-F-227ENST00000485513 RCSD1Q6JBY9 416 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms