RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 NBPF11Q86T75 865 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 ANKS1AQ92625 1134 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 EFCC1Q9HA90 598 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 MKI67P46013 3256 aaKnown RBP13.89□□□□□ -0.19
APTX-227ENST00000485479 CCDC69A6NI79 296 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 TROAPQ12815 778 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 FAM110CQ1W6H9 321 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 RUFY3Q7L099 469 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 DCAF4Q8WV16 495 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 C22orf23Q9BZE7 217 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
APTX-227ENST00000485479 VAT1LQ9HCJ6 419 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
APTX-227ENST00000485479 PSMC4P43686 418 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 CCDC178Q5BJE1 867 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 COL13A1Q5TAT6 717 aaPredicted RBP13.88□□□□□ -0.19
APTX-227ENST00000485479 CCDC82Q8N4S0 544 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 TRIM47Q96LD4 638 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 BACH2Q9BYV9 841 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 ZSWIM6Q9HCJ5 1215 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 HOMER2Q9NSB8 354 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 HOXC10Q9NYD6 342 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 FEM1BQ9UK73 627 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 SYNPO2Q9UMS6 1093 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 RIPK3Q9Y572 518 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 MGAMO43451 1857 aa13.88□□□□□ -0.19
APTX-227ENST00000485479 KLF18A0A0U1RQI7 1052 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 DHX16O60231 1041 aaKnown RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 PLEKHA8P1O95397 391 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 PARP1P09874 1014 aaKnown RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 PSMA5P28066 241 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 GCLCP48506 637 aaPredicted RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 TOB2Q14106 344 aaPredicted RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 CATIPQ7Z7H3 387 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 PRPF38AQ8NAV1 312 aaKnown RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 GPRC5AQ8NFJ5 357 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 TRIM17Q9Y577 477 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 SYDE2Q5VT97 1194 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 REPS2Q8NFH8 660 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 KIF2CQ99661 725 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 MOV10L1Q9BXT6 1211 aaKnown RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 SPATC1LQ9H0A9 340 aa13.87□□□□□ -0.19
APTX-227ENST00000485479 ZNF214Q9UL59 606 aaPredicted RBP13.87□□□□□ -0.19
APTX-227ENST00000485479 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
APTX-227ENST00000485479 LIFRP42702 1097 aa13.86□□□□□ -0.19
APTX-227ENST00000485479 NT5C2P49902 561 aa13.86□□□□□ -0.19
APTX-227ENST00000485479 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
APTX-227ENST00000485479 NCAPG2Q86XI2 1143 aa13.86□□□□□ -0.19
APTX-227ENST00000485479 PDRG1Q9NUG6 133 aa13.86□□□□□ -0.19
APTX-227ENST00000485479 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
APTX-227ENST00000485479 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 KLRF2D3W0D1 207 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 ERCC3P19447 782 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 STK3Q13188 491 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 GRM4Q14833 912 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 HOMER1Q86YM7 354 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 SLC38A10Q9HBR0 1119 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 MORF4L1Q9UBU8 362 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 GABRQQ9UN88 632 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 CTDP1Q9Y5B0 961 aaPredicted RBP13.85□□□□□ -0.19
APTX-227ENST00000485479 ZNF536O15090 1300 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
APTX-227ENST00000485479 CYTH3O43739 400 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 NEK4P51957 841 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 PRKCZQ05513 592 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 USH1GQ495M9 461 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 OTOP1Q7RTM1 612 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 SGMS1Q86VZ5 419 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 CCAR1Q8IX12 1150 aaKnown RBP13.85□□□□□ -0.19
APTX-227ENST00000485479 CHURC1Q8WUH1 139 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
APTX-227ENST00000485479 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 MYH6P13533 1939 aa13.85□□□□□ -0.19
APTX-227ENST00000485479 PALM3A6NDB9 673 aaPredicted RBP13.84□□□□□ -0.19
APTX-227ENST00000485479 CDC27P30260 824 aa13.84□□□□□ -0.19
APTX-227ENST00000485479 AK2P54819 239 aa13.84□□□□□ -0.19
APTX-227ENST00000485479 ANAPC15P60006 121 aa13.84□□□□□ -0.19
APTX-227ENST00000485479 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
APTX-227ENST00000485479 ASPRV1Q53RT3 343 aa13.84□□□□□ -0.19
APTX-227ENST00000485479 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
APTX-227ENST00000485479 FAM160B2Q86V87 743 aa13.84□□□□□ -0.19
APTX-227ENST00000485479 CTCFLQ8NI51 663 aaPredicted RBP13.84□□□□□ -0.19
APTX-227ENST00000485479 ERO1AQ96HE7 468 aa13.84□□□□□ -0.19
APTX-227ENST00000485479 TM6SF1Q9BZW5 370 aa13.84□□□□□ -0.19
APTX-227ENST00000485479 PLXNB2O15031 1838 aa13.84□□□□□ -0.19
APTX-227ENST00000485479 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 ZBTB43O43298 467 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms