RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 SASH3O75995 380 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 STARD3NLO95772 234 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 F13A1P00488 732 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 ZNF165P49910 485 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 POU4F2Q12837 409 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7□□□□□ -1.29
NHLRC3-205ENST00000485407 CWF19L2Q2TBE0 894 aaKnown RBP7□□□□□ -1.29
NHLRC3-205ENST00000485407 BNC2Q6ZN30 1099 aaPredicted RBP7□□□□□ -1.29
NHLRC3-205ENST00000485407 KRT25Q7Z3Z0 450 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 PGBD3Q8N328 593 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 RRAGCQ9HB90 399 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 TCEAL9Q9UHQ7 104 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 SALL4Q9UJQ4 1053 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 CNTNAP4Q9C0A0 1308 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 HEG1Q9ULI3 1381 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 MYH14Q7Z406 1995 aaKnown RBP6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 A0A1W2PNR3 127 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 SPATA31C2B4DYI2 1134 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 ASMTLO95671 621 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 SNRPA1P09661 255 aaKnown RBP6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 SLC39A6Q13433 755 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 DCTN1Q14203 1278 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 MSL1Q68DK7 614 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 GK5Q6ZS86 529 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 NCAPG2Q86XI2 1143 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 TRIM42Q8IWZ5 723 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 ZSCAN1Q8NBB4 408 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 ZNF496Q96IT1 587 aaPredicted RBP6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 TCF12Q99081 682 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 OSMRQ99650 979 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 TNKS2Q9H2K2 1166 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 BRD7Q9NPI1 651 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 KCPQ6ZWJ8 1503 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 CUL9Q8IWT3 2517 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 TUBGCP6Q96RT7 1819 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 PITPNM2Q9BZ72 1349 aa6.99□□□□□ -1.29
NHLRC3-205ENST00000485407 C4BP0C0L5 1744 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 COL5A3P25940 1745 aaPredicted RBP6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 UBR3Q6ZT12 1888 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 FIGNL2A6NMB9 653 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 CHL1O00533 1208 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 ENC1O14682 589 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 RPS6KA4O75676 772 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 DDAH1O94760 285 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 GJB6O95452 261 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 HSPA8P11142 646 aaKnown RBP6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 MSX1P28360 303 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 EIF4A1P60842 406 aaKnown RBP6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 RPS26P62854 115 aaKnown RBP6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 GNAI1P63096 354 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 PTSQ03393 145 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 ITPK1Q13572 414 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 C21orf62-AS1Q17RA5 79 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 PRICKLE2Q7Z3G6 844 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 COL23A1Q86Y22 540 aaPredicted RBP6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 CCNJLQ8IV13 435 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 FAM9BQ8IZU0 186 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 LINC00116Q8NCU8 138 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 SGSM3Q96HU1 749 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 NECAB3Q96P71 396 aaPredicted RBP6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 ZKSCAN3Q9BRR0 538 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 RBSNQ9H1K0 784 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 MIR1-1HGQ9H1L0 117 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 DZANK1Q9NVP4 752 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 PTCH2Q9Y6C5 1203 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 IL16Q14005 1332 aa6.98□□□□□ -1.29
NHLRC3-205ENST00000485407 KDM3BQ7LBC6 1761 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 PRC1O43663 620 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 VIL1P09327 827 aaKnown RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 HOXB7P09629 217 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 ZNF853P0CG23 659 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 CYP19A1P11511 503 aaPredicted RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 CTSOP43234 321 aaPredicted RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 CRKLP46109 303 aaKnown RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 KCNQ4P56696 695 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 TBX4P57082 545 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 SSRP1Q08945 709 aaKnown RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 DALRD3Q5D0E6 543 aaKnown RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 TRAPPC3LQ5T215 181 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 KRT26Q7Z3Y9 468 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 WDR63Q8IWG1 891 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 OR13H1Q8NG92 308 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 GATAD2BQ8WXI9 593 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 LRRC3Q9BY71 257 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 BRMS1Q9HCU9 246 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 C11orf16Q9NQ32 467 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 SEC31BQ9NQW1 1179 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 GPN3Q9UHW5 284 aaPredicted RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 TSPYL4Q9UJ04 414 aa6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 RRP7AQ9Y3A4 280 aaKnown RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 SOS1Q07889 1333 aaPredicted RBP6.97□□□□□ -1.29
NHLRC3-205ENST00000485407 TNRC6CQ9HCJ0 1690 aaKnown RBP6.96□□□□□ -1.29
NHLRC3-205ENST00000485407 CNTNAP1P78357 1384 aa6.96□□□□□ -1.29
NHLRC3-205ENST00000485407 DLL1O00548 723 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 KCNQ3O43525 872 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 MMP20O60882 483 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 PAGE1O75459 146 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 IMPDH2P12268 514 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 TARSP26639 723 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms