RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.49■□□□□ 0.23
NUP188-206ENST00000485158 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.49■□□□□ 0.23
NUP188-206ENST00000485158 PQBP1O60828 265 aaKnown RBP16.49■□□□□ 0.23
NUP188-206ENST00000485158 SNAI1O95863 264 aaPredicted RBP16.49■□□□□ 0.23
NUP188-206ENST00000485158 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
NUP188-206ENST00000485158 PANK1Q8TE04 598 aa16.49■□□□□ 0.23
NUP188-206ENST00000485158 TEX13BQ9BXU2 312 aa16.49■□□□□ 0.23
NUP188-206ENST00000485158 TBX21Q9UL17 535 aa16.49■□□□□ 0.23
NUP188-206ENST00000485158 ELP1O95163 1332 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 DCDC2CA8MYV0 355 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 DUSP11O75319 330 aaKnown RBP16.48■□□□□ 0.23
NUP188-206ENST00000485158 HMMRO75330 724 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 TIMP1P01033 207 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 DNAJB2P25686 324 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 CDK7P50613 346 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 GRIN2CQ14957 1233 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 RASIP1Q5U651 963 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 LENG1Q96BZ8 264 aaPredicted RBP16.48■□□□□ 0.23
NUP188-206ENST00000485158 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 STARD7Q9NQZ5 370 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 ZBTB40Q9NUA8 1239 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 FAM184BQ9ULE4 1060 aa16.48■□□□□ 0.23
NUP188-206ENST00000485158 NKX3-2P78367 333 aa16.47■□□□□ 0.23
NUP188-206ENST00000485158 KCNA10Q16322 511 aa16.47■□□□□ 0.23
NUP188-206ENST00000485158 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
NUP188-206ENST00000485158 MFSD5Q6N075 450 aa16.47■□□□□ 0.23
NUP188-206ENST00000485158 PRPF38AQ8NAV1 312 aaKnown RBP16.47■□□□□ 0.23
NUP188-206ENST00000485158 SLF1Q9BQI6 1058 aa16.47■□□□□ 0.23
NUP188-206ENST00000485158 BOLA2Q9H3K6 86 aa16.47■□□□□ 0.23
NUP188-206ENST00000485158 NYAP2Q9P242 653 aa16.47■□□□□ 0.23
NUP188-206ENST00000485158 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
NUP188-206ENST00000485158 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
NUP188-206ENST00000485158 MROH7Q68CQ1 1323 aa16.46■□□□□ 0.23
NUP188-206ENST00000485158 CHGBP05060 677 aa16.46■□□□□ 0.23
NUP188-206ENST00000485158 MS4A1P11836 297 aa16.46■□□□□ 0.23
NUP188-206ENST00000485158 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
NUP188-206ENST00000485158 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
NUP188-206ENST00000485158 PUS7LQ9H0K6 701 aaKnown RBP16.46■□□□□ 0.23
NUP188-206ENST00000485158 UPF3AQ9H1J1 476 aaKnown RBP16.46■□□□□ 0.23
NUP188-206ENST00000485158 ZNF576Q9H609 170 aa16.46■□□□□ 0.23
NUP188-206ENST00000485158 SYNPO2Q9UMS6 1093 aa16.46■□□□□ 0.23
NUP188-206ENST00000485158 RIPK3Q9Y572 518 aa16.46■□□□□ 0.23
NUP188-206ENST00000485158 F5H6K3 240 aa16.45■□□□□ 0.22
NUP188-206ENST00000485158 RASA1P20936 1047 aa16.45■□□□□ 0.22
NUP188-206ENST00000485158 KLRC3Q07444 240 aa16.45■□□□□ 0.22
NUP188-206ENST00000485158 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
NUP188-206ENST00000485158 ZSCAN25Q6NSZ9 544 aa16.45■□□□□ 0.22
NUP188-206ENST00000485158 C16orf59Q7L2K0 433 aa16.45■□□□□ 0.22
NUP188-206ENST00000485158 PCSK9Q8NBP7 692 aaKnown RBP16.45■□□□□ 0.22
NUP188-206ENST00000485158 GLT1D1Q96MS3 346 aa16.45■□□□□ 0.22
NUP188-206ENST00000485158 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.45■□□□□ 0.229e-13■■■■■ 38.7
NUP188-206ENST00000485158 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
NUP188-206ENST00000485158 MYH7P12883 1935 aa16.45■□□□□ 0.22
NUP188-206ENST00000485158 IGKV6D-41A0A0C4DH26 115 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 MYADML2A6NDP7 307 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 APBB1O00213 710 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 OAZ1P54368 228 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 GJA9P57773 515 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 ACVR2BQ13705 512 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 TJAP1Q5JTD0 557 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 USP38Q8NB14 1042 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 MKL1Q969V6 931 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 TIFAQ96CG3 184 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 FGD4Q96M96 766 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 STRBPQ96SI9 672 aaKnown RBP16.44■□□□□ 0.22
NUP188-206ENST00000485158 SLC38A10Q9HBR0 1119 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 DDX19BQ9UMR2 479 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 CHD7Q9P2D1 2997 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 NCOR1O75376 2440 aa16.44■□□□□ 0.22
NUP188-206ENST00000485158 BDP1A6H8Y1 2624 aa16.43■□□□□ 0.22
NUP188-206ENST00000485158 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
NUP188-206ENST00000485158 ADCY6O43306 1168 aa16.43■□□□□ 0.22
NUP188-206ENST00000485158 NDUFB10O96000 172 aa16.43■□□□□ 0.22
NUP188-206ENST00000485158 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
NUP188-206ENST00000485158 PPIGQ13427 754 aaKnown RBP eCLIP16.43■□□□□ 0.22
NUP188-206ENST00000485158 TMEM240Q5SV17 173 aa16.43■□□□□ 0.22
NUP188-206ENST00000485158 CCDC174Q6PII3 467 aa16.43■□□□□ 0.22
NUP188-206ENST00000485158 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
NUP188-206ENST00000485158 ARVCFO00192 962 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 CTAGE5O15320 804 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 ASGR1P07306 291 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 CCDC144BQ3MJ40 725 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 AKNAD1Q5T1N1 836 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 FAM126BQ8IXS8 530 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 CHST13Q8NET6 341 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 PBX4Q9BYU1 374 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 KATNBL1Q9H079 304 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.42■□□□□ 0.22
NUP188-206ENST00000485158 FBXO40Q9UH90 709 aa16.42■□□□□ 0.22
NUP188-206ENST00000485158 ZHX1Q9UKY1 873 aaPredicted RBP16.42■□□□□ 0.22
NUP188-206ENST00000485158 A0A0U1RQG5 324 aaPredicted RBP16.41■□□□□ 0.22
NUP188-206ENST00000485158 ZBED4O75132 1171 aa16.41■□□□□ 0.22
NUP188-206ENST00000485158 CD4P01730 458 aa16.41■□□□□ 0.22
NUP188-206ENST00000485158 TMEM199Q8N511 208 aa16.41■□□□□ 0.22
NUP188-206ENST00000485158 SLC43A3Q8NBI5 491 aa16.41■□□□□ 0.22
NUP188-206ENST00000485158 GMCL1P1Q8NEA9 526 aa16.41■□□□□ 0.22
NUP188-206ENST00000485158 SPC25Q9HBM1 224 aa16.41■□□□□ 0.22
NUP188-206ENST00000485158 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms