RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 KIAA0907Q7Z7F0 614 aaPredicted RBP6.26□□□□□ -1.41
CCDC39-205ENST00000485055 VPS37AQ8NEZ2 397 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 IDI2Q9BXS1 227 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 GGA3Q9NZ52 723 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 ZNF236Q9UL36 1845 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 TMEM238LA0A1B0GVL6 79 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 MANSC4A6NHS7 340 aaPredicted RBP6.26□□□□□ -1.41
CCDC39-205ENST00000485055 A6NJY4 79 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 RIMBP2O15034 1052 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 SREBF2Q12772 1141 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 ANGEL2Q5VTE6 544 aaKnown RBP6.26□□□□□ -1.41
CCDC39-205ENST00000485055 ARMC9Q7Z3E5 817 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 ZGPATQ8N5A5 531 aaKnown RBP6.26□□□□□ -1.41
CCDC39-205ENST00000485055 ZNF579Q8NAF0 562 aaKnown RBP6.26□□□□□ -1.41
CCDC39-205ENST00000485055 PXYLP1Q8TE99 480 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 KIF12Q96FN5 646 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 CXorf56Q9H5V9 222 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 LUZP4Q9P127 313 aa6.26□□□□□ -1.41
CCDC39-205ENST00000485055 A0A0G2JMZ2 1700 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 CCDC163A0A0D9SF12 145 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 GNRH1P01148 92 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 C21orf62-AS1Q17RA5 79 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 COL13A1Q5TAT6 717 aaPredicted RBP6.25□□□□□ -1.41
CCDC39-205ENST00000485055 LMBRD2Q68DH5 695 aaPredicted RBP6.25□□□□□ -1.41
CCDC39-205ENST00000485055 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 SSH3Q8TE77 659 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.25□□□□□ -1.41
CCDC39-205ENST00000485055 NELL1Q92832 810 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 ZIM2Q9NZV7 527 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 POLG2Q9UHN1 485 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 FEZ2Q9UHY8 353 aaPredicted RBP6.25□□□□□ -1.41
CCDC39-205ENST00000485055 AKAP2Q9Y2D5 859 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 GREB1LQ9C091 1923 aaPredicted RBP6.25□□□□□ -1.41
CCDC39-205ENST00000485055 ENTPD3O75355 529 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 NF2P35240 595 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 MCL1Q07820 350 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 TBC1D10BQ4KMP7 808 aaPredicted RBP6.25□□□□□ -1.41
CCDC39-205ENST00000485055 FAM83BQ5T0W9 1011 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 SPRYD7Q5W111 196 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 RPAINQ86UA6 219 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 MYO1HQ8N1T3 1032 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 TTC8Q8TAM2 541 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 DEPDC7Q96QD5 511 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 CSRNP1Q96S65 589 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 RETREG1Q9H6L5 497 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 CYLDQ9NQC7 956 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 RNF186Q9NXI6 227 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 DENND2AQ9ULE3 1009 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 ADGRA2Q96PE1 1338 aa6.25□□□□□ -1.41
CCDC39-205ENST00000485055 PRPF40AO75400 957 aaKnown RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 IFIT1P09914 478 aaKnown RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 KLRK1P26718 216 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 ETFBP38117 255 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 SLC4A3P48751 1232 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 CLDN10P78369 228 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 HTRA3P83110 453 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 DLGAP5Q15398 846 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 TUSC1Q2TAM9 212 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 ATF7IPQ6VMQ6 1270 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 TTC30AQ86WT1 665 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 KIAA1958Q8N8K9 716 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 TEX19Q8NA77 164 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 MKL1Q969V6 931 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 PURBQ96QR8 312 aaKnown RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 CXXC1Q9P0U4 656 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 ZNF70Q9UC06 446 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 ADM5C9JUS6 153 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 USP2O75604 605 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 SLC5A1P13866 664 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 EPB42P16452 691 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 HUNKP57058 714 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 PAK2Q13177 524 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 NR6A1Q15406 480 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 CAVIN4Q5BKX8 364 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 IL31Q6EBC2 164 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 RELL1Q8IUW5 271 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 PLPP6Q8IY26 295 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 IFNL3Q8IZI9 196 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 CHCHD4Q8N4Q1 142 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 IP6K2Q9UHH9 426 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 KCNH4Q9UQ05 1017 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 RABGAP1Q9Y3P9 1069 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 PARP14Q460N5 1801 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 G3V3G9 751 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 MYO1BO43795 1136 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 NEK3P51956 506 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 PRMT2P55345 433 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 GTF2IP78347 998 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 KIF23Q02241 960 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 SWI5Q1ZZU3 235 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 CFAP100Q494V2 611 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 ANO1Q5XXA6 986 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 CYP4F22Q6NT55 531 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 APOBEC3HQ6NTF7 200 aaKnown RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 APPBP2Q92624 585 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 WNK4Q96J92 1243 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 CNNM1Q9NRU3 951 aa6.24□□□□□ -1.41
CCDC39-205ENST00000485055 ABT1Q9ULW3 272 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms