RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 KCNA10Q16322 511 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 CTR9Q6PD62 1173 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 MAMDC4Q6UXC1 1216 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 PRPF38AQ8NAV1 312 aaKnown RBP13.83□□□□□ -0.2
COL13A1-209ENST00000484990 PANK1Q8TE04 598 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 GLT1D1Q96MS3 346 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 SLF1Q9BQI6 1058 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 CHMP4BQ9H444 224 aaKnown RBP13.83□□□□□ -0.2
COL13A1-209ENST00000484990 ZNF576Q9H609 170 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 ELP1O95163 1332 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 PARP14Q460N5 1801 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 ROBO3Q96MS0 1386 aa13.83□□□□□ -0.2
COL13A1-209ENST00000484990 ZBED4O75132 1171 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 DNAJB2P25686 324 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 HNRNPUQ00839 825 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL13A1-209ENST00000484990 PPIGQ13427 754 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL13A1-209ENST00000484990 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 SNRNP48Q6IEG0 339 aaKnown RBP13.82□□□□□ -0.2
COL13A1-209ENST00000484990 MFSD5Q6N075 450 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 KLHDC9Q8NEP7 349 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 REPS2Q8NFH8 660 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 HAUS7Q99871 368 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 MKNK2Q9HBH9 465 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 NYAP2Q9P242 653 aa13.82□□□□□ -0.2
COL13A1-209ENST00000484990 ARPP21Q9UBL0 812 aaPredicted RBP13.82□□□□□ -0.2
COL13A1-209ENST00000484990 ZHX1Q9UKY1 873 aaPredicted RBP13.82□□□□□ -0.2
COL13A1-209ENST00000484990 F5H6K3 240 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 SNAI1O95863 264 aaPredicted RBP13.81□□□□□ -0.2
COL13A1-209ENST00000484990 SLC4A3P48751 1232 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 KLRC3Q07444 240 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 ACVR2BQ13705 512 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 SLFNL1Q499Z3 407 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 TJAP1Q5JTD0 557 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 CCDC129Q6ZRS4 1044 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
COL13A1-209ENST00000484990 TMEM199Q8N511 208 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 TIFAQ96CG3 184 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 GAS2L1Q99501 681 aaPredicted RBP13.81□□□□□ -0.2
COL13A1-209ENST00000484990 ABHD16BQ9H3Z7 469 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 SYNRGQ9UMZ2 1314 aa13.81□□□□□ -0.2
COL13A1-209ENST00000484990 PRUNE2Q8WUY3 3088 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 TTC28Q96AY4 2481 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 SMIM22K7EJ46 135 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 ATP2A1O14983 1001 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 TLR3O15455 904 aaKnown RBP13.8□□□□□ -0.2
COL13A1-209ENST00000484990 C6orf222P0C671 652 aaPredicted RBP13.8□□□□□ -0.2
COL13A1-209ENST00000484990 CST5P28325 142 aaPredicted RBP13.8□□□□□ -0.2
COL13A1-209ENST00000484990 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 CCSAPQ6IQ19 270 aaPredicted RBP13.8□□□□□ -0.2
COL13A1-209ENST00000484990 CPXCR1Q8N123 301 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 ANKRD35Q8N283 1001 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 LENG1Q96BZ8 264 aaPredicted RBP13.8□□□□□ -0.2
COL13A1-209ENST00000484990 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL13A1-209ENST00000484990 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 ZBED9Q6R2W3 1325 aa13.8□□□□□ -0.2
COL13A1-209ENST00000484990 DNAJC25-GNG10A0A024R161 153 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 A0A0U1RQG5 324 aaPredicted RBP13.79□□□□□ -0.2
COL13A1-209ENST00000484990 ARVCFO00192 962 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 ASGR1P07306 291 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 CDK7P50613 346 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 GNASQ5JWF2 1037 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 GIMAP6Q6P9H5 292 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 ZNF444Q8N0Y2 327 aaPredicted RBP13.79□□□□□ -0.2
COL13A1-209ENST00000484990 CHST13Q8NET6 341 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 PUS7LQ9H0K6 701 aaKnown RBP13.79□□□□□ -0.2
COL13A1-209ENST00000484990 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
COL13A1-209ENST00000484990 CLIP2Q9UDT6 1046 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 RIPK3Q9Y572 518 aa13.79□□□□□ -0.2
COL13A1-209ENST00000484990 VCANP13611 3396 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 FDX1P10109 184 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 RASA1P20936 1047 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 GJA9P57773 515 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 CCDC144BQ3MJ40 725 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 TMEM240Q5SV17 173 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
COL13A1-209ENST00000484990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL13A1-209ENST00000484990 NUP88Q99567 741 aaPredicted RBP13.78□□□□□ -0.2
COL13A1-209ENST00000484990 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL13A1-209ENST00000484990 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
COL13A1-209ENST00000484990 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 MSRAQ9UJ68 235 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 FEM1BQ9UK73 627 aa13.78□□□□□ -0.2
COL13A1-209ENST00000484990 EYSQ5T1H1 3165 aa13.77□□□□□ -0.2
COL13A1-209ENST00000484990 TNFRSF10AO00220 468 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 NDUFB10O96000 172 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 CSF2RAP15509 400 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 OAZ1P54368 228 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 C16orf59Q7L2K0 433 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 SIRT2Q8IXJ6 389 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.21
COL13A1-209ENST00000484990 MKL1Q969V6 931 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 KIFC2Q96AC6 838 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 STRBPQ96SI9 672 aaKnown RBP13.77□□□□□ -0.21
COL13A1-209ENST00000484990 SEZ6LQ9BYH1 1024 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 PBX4Q9BYU1 374 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms