RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 A0A1W2PQJ5 194 aa7□□□□□ -1.29
SMC4-215ENST00000484799 WTIPA6NIX2 430 aaPredicted RBP7□□□□□ -1.29
SMC4-215ENST00000484799 USP2O75604 605 aaPredicted RBP7□□□□□ -1.29
SMC4-215ENST00000484799 TCEAL1Q15170 157 aa7□□□□□ -1.29
SMC4-215ENST00000484799 KCNA10Q16322 511 aa7□□□□□ -1.29
SMC4-215ENST00000484799 BBS9Q3SYG4 887 aa7□□□□□ -1.29
SMC4-215ENST00000484799 GALNT18Q6P9A2 607 aa7□□□□□ -1.29
SMC4-215ENST00000484799 CPLX3Q8WVH0 158 aa7□□□□□ -1.29
SMC4-215ENST00000484799 MAP6Q96JE9 813 aa7□□□□□ -1.29
SMC4-215ENST00000484799 TNFRSF10DQ9UBN6 386 aa7□□□□□ -1.29
SMC4-215ENST00000484799 ZNRF3Q9ULT6 936 aa7□□□□□ -1.29
SMC4-215ENST00000484799 TAF6LQ9Y6J9 622 aa7□□□□□ -1.29
SMC4-215ENST00000484799 NUAK1O60285 661 aa6.99□□□□□ -1.29
SMC4-215ENST00000484799 TP53P04637 393 aaPredicted RBP6.99□□□□□ -1.29
SMC4-215ENST00000484799 GLDCP23378 1020 aa6.99□□□□□ -1.29
SMC4-215ENST00000484799 CFPP27918 469 aa6.99□□□□□ -1.29
SMC4-215ENST00000484799 COL9A2Q14055 689 aaPredicted RBP6.99□□□□□ -1.29
SMC4-215ENST00000484799 TIGD5Q53EQ6 642 aa6.99□□□□□ -1.29
SMC4-215ENST00000484799 JAMLQ86YT9 394 aa6.99□□□□□ -1.29
SMC4-215ENST00000484799 C7orf61Q8IZ16 206 aa6.99□□□□□ -1.29
SMC4-215ENST00000484799 SMARCC1Q92922 1105 aaPredicted RBP6.99□□□□□ -1.29
SMC4-215ENST00000484799 SMG5Q9UPR3 1016 aaKnown RBP6.99□□□□□ -1.29
SMC4-215ENST00000484799 NRDCO43847 1150 aa6.98□□□□□ -1.29
SMC4-215ENST00000484799 PEX10O60683 326 aa6.98□□□□□ -1.29
SMC4-215ENST00000484799 GSNP06396 782 aa6.98□□□□□ -1.29
SMC4-215ENST00000484799 ZSCAN22P10073 491 aaPredicted RBP6.98□□□□□ -1.29
SMC4-215ENST00000484799 BMP8BP34820 402 aa6.98□□□□□ -1.29
SMC4-215ENST00000484799 GALK1P51570 392 aa6.98□□□□□ -1.29
SMC4-215ENST00000484799 FCRL2Q96LA5 508 aaPredicted RBP6.98□□□□□ -1.29
SMC4-215ENST00000484799 ZNF552Q9H707 407 aaPredicted RBP6.98□□□□□ -1.29
SMC4-215ENST00000484799 CRTAC1Q9NQ79 661 aa6.98□□□□□ -1.29
SMC4-215ENST00000484799 FAM86C1Q9NVL1 165 aa6.98□□□□□ -1.29
SMC4-215ENST00000484799 DDX41Q9UJV9 622 aaKnown RBP6.98□□□□□ -1.29
SMC4-215ENST00000484799 MINPP1Q9UNW1 487 aa6.98□□□□□ -1.29
SMC4-215ENST00000484799 SEMA7AO75326 666 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 MPOP05164 745 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 GSTM1P09488 218 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 VAV1P15498 845 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 PMS1P54277 932 aaKnown RBP6.97□□□□□ -1.29
SMC4-215ENST00000484799 SRSF3P84103 164 aaKnown RBP6.97□□□□□ -1.29
SMC4-215ENST00000484799 TMEM62Q0P6H9 643 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 SIAH1Q8IUQ4 282 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 KRTAP9-9Q9BYP9 154 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 KRTAP9-4Q9BYQ2 154 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 SP110Q9HB58 689 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 PRR13Q9NZ81 148 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 EBF1Q9UH73 591 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
SMC4-215ENST00000484799 PPT2Q9UMR5 302 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 SF3B6Q9Y3B4 125 aaKnown RBP6.97□□□□□ -1.29
SMC4-215ENST00000484799 SLC12A7Q9Y666 1083 aa6.97□□□□□ -1.29
SMC4-215ENST00000484799 RFXAPO00287 272 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 ABLIM1O14639 778 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 PNLIPP16233 465 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 GUCY2CP25092 1073 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 EIF6P56537 245 aaKnown RBP6.96□□□□□ -1.3
SMC4-215ENST00000484799 DLG4P78352 724 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 CYP4F8P98187 520 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 LAPTM5Q13571 262 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 FBLN7Q53RD9 439 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 ZNF385BQ569K4 471 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 LDLRAD1Q5T700 205 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 TDRD10Q5VZ19 366 aaKnown RBP6.96□□□□□ -1.3
SMC4-215ENST00000484799 ZPBP2Q6X784 338 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 ADAT2Q7Z6V5 191 aaKnown RBP6.96□□□□□ -1.3
SMC4-215ENST00000484799 HHIPL1Q96JK4 782 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 MCOLN1Q9GZU1 580 aa6.96□□□□□ -1.3
SMC4-215ENST00000484799 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 A0A1W2PQ45 241 aaPredicted RBP6.95□□□□□ -1.3
SMC4-215ENST00000484799 A0A1W2PQY0 241 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 ITGA4P13612 1032 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 PAK2Q13177 524 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 PPP2R5EQ16537 467 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 HLA-DQA1Q5Y7H0 255 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 UNC5AQ6ZN44 842 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 NLRX1Q86UT6 975 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
SMC4-215ENST00000484799 BRF1Q92994 677 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 IRF2BPLQ9H1B7 796 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 EFR3BQ9Y2G0 817 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 ZNF281Q9Y2X9 895 aa6.95□□□□□ -1.3
SMC4-215ENST00000484799 PRKCAP17252 672 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 VAMP1P23763 118 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 RACK1P63244 317 aaKnown RBP6.94□□□□□ -1.3
SMC4-215ENST00000484799 POU4F1Q01851 419 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 GNPTABQ3T906 1256 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 ANKRD39Q53RE8 183 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 CRTC3Q6UUV7 619 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 CCDC81Q6ZN84 652 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 RBBP8NLQ8NC74 664 aaPredicted RBP6.94□□□□□ -1.3
SMC4-215ENST00000484799 NUP43Q8NFH3 380 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 MRRFQ96E11 262 aaKnown RBP6.94□□□□□ -1.3
SMC4-215ENST00000484799 AP5S1Q9NUS5 200 aa6.94□□□□□ -1.3
SMC4-215ENST00000484799 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.94□□□□□ -1.3
SMC4-215ENST00000484799 GPR55Q9Y2T6 319 aaPredicted RBP6.94□□□□□ -1.3
SMC4-215ENST00000484799 C9IYK1 514 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 ZNF205O95201 554 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms