RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 COL24A1Q17RW2 1714 aa22.2■■□□□ 1.14
LIMS2-215ENST00000484252 CCDC194A0A1B0GVG4 234 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 M0R2N6 131 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 LAD1O00515 517 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 VEGFAP15692 232 aaPredicted RBP22.19■■□□□ 1.14
LIMS2-215ENST00000484252 KCNB1Q14721 858 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 RC3H1Q5TC82 1133 aaKnown RBP22.19■■□□□ 1.14
LIMS2-215ENST00000484252 NBPF5PQ86XG9 351 aaPredicted RBP22.19■■□□□ 1.14
LIMS2-215ENST00000484252 ARFGAP3Q9NP61 516 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 TCP11L1Q9NUJ3 509 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 MKRN1Q9UHC7 482 aaKnown RBP22.19■■□□□ 1.14
LIMS2-215ENST00000484252 POTEB2H3BUK9 544 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 AMOTL1Q8IY63 956 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 PARD6BQ9BYG5 372 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 IRX2Q9BZI1 471 aaPredicted RBP22.19■■□□□ 1.14
LIMS2-215ENST00000484252 VPS16Q9H269 839 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 IL17RBQ9NRM6 502 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 TAB2Q9NYJ8 693 aa22.19■■□□□ 1.14
LIMS2-215ENST00000484252 FAM205AQ6ZU69 1335 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 CTAGE9A4FU28 777 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 USP17L8P0C7I0 530 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 USP5P45974 858 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 CHMP4BP1P59074 171 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 BRD3Q15059 726 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 ZNF569Q5MCW4 686 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 ADSSL1Q8N142 457 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 NUP88Q99567 741 aaPredicted RBP22.18■■□□□ 1.14
LIMS2-215ENST00000484252 IRS2Q9Y4H2 1338 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 ADAMTS3O15072 1205 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 PRCPP42785 496 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 GSTO1P78417 241 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 TPTE2Q6XPS3 522 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 WDR66Q8TBY9 1149 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 LZTS2Q9BRK4 669 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 UBXN6Q9BZV1 441 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 CCSER1Q9C0I3 900 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 ST7Q9NRC1 585 aa22.18■■□□□ 1.14
LIMS2-215ENST00000484252 CCDC151A5D8V7 595 aa22.17■■□□□ 1.14
LIMS2-215ENST00000484252 SEC31AO94979 1220 aaKnown RBP22.17■■□□□ 1.14
LIMS2-215ENST00000484252 TBC1D8O95759 1140 aa22.17■■□□□ 1.14
LIMS2-215ENST00000484252 STIM1Q13586 685 aa22.17■■□□□ 1.14
LIMS2-215ENST00000484252 GPKOWQ92917 476 aaPredicted RBP eCLIP22.17■■□□□ 1.14
LIMS2-215ENST00000484252 MAGEF1Q9HAY2 307 aa22.17■■□□□ 1.14
LIMS2-215ENST00000484252 MAD2L2Q9UI95 211 aa22.17■■□□□ 1.14
LIMS2-215ENST00000484252 NUTM2BA6NNL0 878 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-215ENST00000484252 NUTM2EB1AL46 878 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-215ENST00000484252 RPS6KA4O75676 772 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 EEF1GP26641 437 aaKnown RBP22.16■■□□□ 1.14
LIMS2-215ENST00000484252 PRPHP41219 470 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 ERVK-24P63145 666 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 MKNK2Q9HBH9 465 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 PCDHA6Q9UN73 950 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 GDAQ9Y2T3 454 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 PCDHA8Q9Y5H6 950 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 LTBP4Q8N2S1 1624 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 LDHBP07195 334 aaKnown RBP22.16■■□□□ 1.14
LIMS2-215ENST00000484252 PARP1P09874 1014 aaKnown RBP22.16■■□□□ 1.14
LIMS2-215ENST00000484252 KIF4BQ2VIQ3 1234 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 NOC3LQ8WTT2 800 aaKnown RBP22.16■■□□□ 1.14
LIMS2-215ENST00000484252 EPC1Q9H2F5 836 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 CUEDC2Q9H467 287 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 THAP9Q9H5L6 903 aa22.16■■□□□ 1.14
LIMS2-215ENST00000484252 A0A1W2PQC6 194 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 COBLO75128 1261 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 BAG3O95817 575 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 KRT9P35527 623 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 UBA7P41226 1012 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 UBXN1Q04323 297 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 STAG2Q8N3U4 1231 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 BARHL2Q9NY43 387 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 LGALS16A8MUM7 142 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 ZPR1O75312 459 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 NAALADL2Q58DX5 795 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 ACRBPQ8NEB7 543 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 RASSF8Q8NHQ8 419 aa22.15■■□□□ 1.14
LIMS2-215ENST00000484252 NAPGQ99747 312 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-215ENST00000484252 RHOBTB3O94955 611 aa22.14■■□□□ 1.13
LIMS2-215ENST00000484252 TSPY3P0CV98 308 aa22.14■■□□□ 1.13
LIMS2-215ENST00000484252 TSPY8P0CW00 308 aa22.14■■□□□ 1.13
LIMS2-215ENST00000484252 PPP4CP60510 307 aa22.14■■□□□ 1.13
LIMS2-215ENST00000484252 WHAMMP3Q1A5X7 153 aa22.14■■□□□ 1.13
LIMS2-215ENST00000484252 CERS3Q8IU89 383 aa22.14■■□□□ 1.13
LIMS2-215ENST00000484252 ZNF444Q8N0Y2 327 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-215ENST00000484252 SLC35F6Q8N357 371 aa22.14■■□□□ 1.13
LIMS2-215ENST00000484252 HNRNPLLQ8WVV9 542 aaKnown RBP22.14■■□□□ 1.13
LIMS2-215ENST00000484252 KBTBD4Q9NVX7 518 aa22.14■■□□□ 1.13
LIMS2-215ENST00000484252 A0A0U1RQJ8 604 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 STXBP3O00186 592 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 PSMA7O14818 248 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 TM4SF1P30408 202 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 TYW1BQ6NUM6 668 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 TXNRD3Q86VQ6 643 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 IRF2BP1Q8IU81 584 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 MB21D1Q8N884 522 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 RASGRP4Q8TDF6 673 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 ATRIPQ8WXE1 791 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 AK8Q96MA6 479 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 ZNF287Q9HBT7 754 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 CALCOCO1Q9P1Z2 691 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 LEMD3Q9Y2U8 911 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms