RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 ZNF532Q9HCE3 1301 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 DOCK2Q92608 1830 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 BTBD18B2RXH4 712 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 ZEB2O60315 1214 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 PDE6AP16499 860 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 PBX1P40424 430 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 NAP1L1P55209 391 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 GRIN1Q05586 938 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 RBBP5Q15291 538 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 SPECC1Q5M775 1068 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 CYB5D1Q6P9G0 228 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 VGLL2Q8N8G2 317 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 LMBR1Q8WVP7 490 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 CNNM2Q9H8M5 875 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 SAMSN1Q9NSI8 373 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 CEP131Q9UPN4 1083 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 MYH3P11055 1940 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 FECHP22830 423 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 RPS6KA3P51812 740 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 RCAN1P53805 252 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 PSMD2Q13200 908 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 SPATS2Q86XZ4 545 aaKnown RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 FAM210AQ96ND0 272 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 HINFPQ9BQA5 517 aa12.94□□□□□ -0.34
SEC61A1-205ENST00000483956 SEMA3EO15041 775 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 ATP1A2P50993 1020 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 HSPA2P54652 639 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 IFT88Q13099 833 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 ZNF827Q17R98 1081 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 ACCSLQ4AC99 568 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 NAA35Q5VZE5 725 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 MICALCLQ6ZW33 695 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 YTHDF3Q7Z739 585 aaKnown RBP12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 TRIM22Q8IYM9 498 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 MTA3Q9BTC8 594 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 MYL10Q9BUA6 226 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 UBE2Q2LH0YL09 131 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 AMPD2Q01433 879 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 TRAF1Q13077 416 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 SPATA1Q5VX52 437 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 RCSD1Q6JBY9 416 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 CPLX3Q8WVH0 158 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 CCDC114Q96M63 670 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 BCL9LQ86UU0 1499 aa12.93□□□□□ -0.34
SEC61A1-205ENST00000483956 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 SLC8A3P57103 927 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 PLCB4Q15147 1175 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 CDKAL1Q5VV42 579 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 FUKQ8N0W3 1084 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 ARL8AQ96BM9 186 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 CCDC51Q96ER9 411 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 CTAGE1Q96RT6 745 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 KRT23Q9C075 422 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 ZSWIM5Q9P217 1185 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 LRP5O75197 1615 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 SHANK3Q9BYB0 1731 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 IDH1O75874 414 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 DEXIO95424 95 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 MCM3P25205 808 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 GUCY1A2P33402 732 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 CUL4BQ13620 913 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 PPFIBP1Q86W92 1011 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 ZNF513Q8N8E2 541 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 AIDAQ96BJ3 306 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 SAAL1Q96ER3 474 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-205ENST00000483956 MFAP3LO75121 409 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 LDHAL6AQ6ZMR3 332 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 MAB21L3Q8N8X9 362 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 MMS19Q96T76 1030 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 EPB41L4AQ9HCS5 686 aaPredicted RBP12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 STRN4Q9NRL3 753 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 HAUS2Q9NVX0 235 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 AATFQ9NY61 560 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 PCDHB6Q9Y5E3 794 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 PECAM1P16284 738 aaPredicted RBP12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 SKOR1P84550 965 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 RTN1Q16799 776 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 TTMPQ5BVD1 217 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 GRAMD1CQ8IYS0 662 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 SH2D3CQ8N5H7 860 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 TTLL11Q8NHH1 800 aa12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 ZNF473Q8WTR7 871 aaKnown RBP12.91□□□□□ -0.34
SEC61A1-205ENST00000483956 RRP36Q96EU6 259 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms