RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZBED9Q6R2W3 1325 aa15.55■□□□□ 0.08
UBR4-213ENST00000483922 APBB1O00213 710 aa15.55■□□□□ 0.08
UBR4-213ENST00000483922 CTAGE5O15320 804 aa15.55■□□□□ 0.08
UBR4-213ENST00000483922 KCTD2Q14681 263 aa15.55■□□□□ 0.08
UBR4-213ENST00000483922 TMEM240Q5SV17 173 aa15.55■□□□□ 0.08
UBR4-213ENST00000483922 MAMDC4Q6UXC1 1216 aa15.55■□□□□ 0.08
UBR4-213ENST00000483922 FTSJ3Q8IY81 847 aaKnown RBP15.55■□□□□ 0.08
UBR4-213ENST00000483922 BOLA2Q9H3K6 86 aa15.55■□□□□ 0.08
UBR4-213ENST00000483922 RAPGEFL1Q9UHV5 662 aa15.55■□□□□ 0.08
UBR4-213ENST00000483922 ADGRE1Q14246 886 aa15.54■□□□□ 0.08
UBR4-213ENST00000483922 MFSD5Q6N075 450 aa15.54■□□□□ 0.08
UBR4-213ENST00000483922 PBX4Q9BYU1 374 aa15.54■□□□□ 0.08
UBR4-213ENST00000483922 PUS7LQ9H0K6 701 aaKnown RBP15.54■□□□□ 0.08
UBR4-213ENST00000483922 KANSL2Q9H9L4 492 aa15.54■□□□□ 0.08
UBR4-213ENST00000483922 STARD7Q9NQZ5 370 aa15.54■□□□□ 0.08
UBR4-213ENST00000483922 PAG1Q9NWQ8 432 aa15.54■□□□□ 0.08
UBR4-213ENST00000483922 CSF2RAP15509 400 aa15.53■□□□□ 0.08
UBR4-213ENST00000483922 TJAP1Q5JTD0 557 aa15.53■□□□□ 0.08
UBR4-213ENST00000483922 TIFAQ96CG3 184 aa15.53■□□□□ 0.08
UBR4-213ENST00000483922 KATNBL1Q9H079 304 aa15.53■□□□□ 0.08
UBR4-213ENST00000483922 BCL11AQ9H165 835 aa15.53■□□□□ 0.08
UBR4-213ENST00000483922 SH2D4AQ9H788 454 aa15.53■□□□□ 0.08
UBR4-213ENST00000483922 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
UBR4-213ENST00000483922 BDP1A6H8Y1 2624 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 SYNGAP1Q96PV0 1343 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 MOXD2PA6NHM9 499 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 DCDC2CA8MYV0 355 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 DUSP11O75319 330 aaKnown RBP15.52■□□□□ 0.08
UBR4-213ENST00000483922 ASGR1P07306 291 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 ACRP10323 421 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 ATP5JP18859 108 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 RASA1P20936 1047 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 PTGS1P23219 599 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 SNRNP48Q6IEG0 339 aaKnown RBP15.52■□□□□ 0.08
UBR4-213ENST00000483922 CLASRPQ8N2M8 674 aaKnown RBP15.52■□□□□ 0.08
UBR4-213ENST00000483922 SYMPKQ92797 1274 aaKnown RBP15.52■□□□□ 0.08
UBR4-213ENST00000483922 PRDM12Q9H4Q4 367 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 SLC4A4Q9Y6R1 1079 aa15.52■□□□□ 0.08
UBR4-213ENST00000483922 MYH8P13535 1937 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 GREB1LQ9C091 1923 aaPredicted RBP15.51■□□□□ 0.07
UBR4-213ENST00000483922 F5H6K3 240 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 TNFRSF10AO00220 468 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 CST5P28325 142 aaPredicted RBP15.51■□□□□ 0.07
UBR4-213ENST00000483922 KLRC3Q07444 240 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 ACVR2BQ13705 512 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 ZNF365Q70YC5 407 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 MSL3Q8N5Y2 521 aaKnown RBP15.51■□□□□ 0.07
UBR4-213ENST00000483922 NUP133Q8WUM0 1156 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 PPM1EQ8WY54 764 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 VWCEQ96DN2 955 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 KIF1BPQ96EK5 621 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 HAUS7Q99871 368 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 SLF1Q9BQI6 1058 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 UPF3AQ9H1J1 476 aaKnown RBP15.51■□□□□ 0.07
UBR4-213ENST00000483922 ZHX1Q9UKY1 873 aaPredicted RBP15.51■□□□□ 0.07
UBR4-213ENST00000483922 CNPY2Q9Y2B0 182 aa15.51■□□□□ 0.07
UBR4-213ENST00000483922 ELP1O95163 1332 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 IGKV6D-41A0A0C4DH26 115 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 ATP2A1O14983 1001 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 RAD21O60216 631 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 NDUFB10O96000 172 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 IFIT2P09913 472 aaKnown RBP15.5■□□□□ 0.07
UBR4-213ENST00000483922 COL9A1P20849 921 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 GJA9P57773 515 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 UBE3CQ15386 1083 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 CCDC144BQ3MJ40 725 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 HSP90AB4PQ58FF6 505 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 FAM126BQ8IXS8 530 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 STK11IPQ8N1F8 1099 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 TEX13BQ9BXU2 312 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 GOPCQ9HD26 462 aa15.5■□□□□ 0.07
UBR4-213ENST00000483922 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.5■□□□□ 0.07
UBR4-213ENST00000483922 CXXC1Q9P0U4 656 aaPredicted RBP15.5■□□□□ 0.07
UBR4-213ENST00000483922 DDX49Q9Y6V7 483 aaKnown RBP15.5■□□□□ 0.07
UBR4-213ENST00000483922 ASTN1O14525 1302 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 GRIN2DO15399 1336 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 UMODL1Q5DID0 1318 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.49■□□□□ 0.07
UBR4-213ENST00000483922 GSG1L2A8MUP6 293 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 ARVCFO00192 962 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 CD4P01730 458 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 C6orf222P0C671 652 aaPredicted RBP15.49■□□□□ 0.07
UBR4-213ENST00000483922 SLC4A3P48751 1232 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 NKX3-2P78367 333 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 TMEM63BQ5T3F8 832 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.49■□□□□ 0.07
UBR4-213ENST00000483922 ZNF467Q7Z7K2 595 aaPredicted RBP15.49■□□□□ 0.07
UBR4-213ENST00000483922 CPXCR1Q8N123 301 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 DDX11Q96FC9 970 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 STRBPQ96SI9 672 aaKnown RBP15.49■□□□□ 0.07
UBR4-213ENST00000483922 PPP1R12CQ9BZL4 782 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 RAVER2Q9HCJ3 691 aaKnown RBP15.49■□□□□ 0.07
UBR4-213ENST00000483922 NYAP2Q9P242 653 aa15.49■□□□□ 0.07
UBR4-213ENST00000483922 CYP2C18P33260 490 aa15.48■□□□□ 0.07
UBR4-213ENST00000483922 BEX3Q00994 111 aa15.48■□□□□ 0.07
UBR4-213ENST00000483922 CNTN2Q02246 1040 aa15.48■□□□□ 0.07
UBR4-213ENST00000483922 SBK1Q52WX2 424 aa15.48■□□□□ 0.07
UBR4-213ENST00000483922 RPAP2Q8IXW5 612 aaPredicted RBP15.48■□□□□ 0.07
UBR4-213ENST00000483922 PRPF38AQ8NAV1 312 aaKnown RBP15.48■□□□□ 0.07
UBR4-213ENST00000483922 SLC43A3Q8NBI5 491 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms