RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 GPT2Q8TD30 523 aa11.64□□□□□ -0.55
HDAC6-226ENST00000483656 LEO1Q8WVC0 666 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-226ENST00000483656 WRNIP1Q96S55 665 aa11.64□□□□□ -0.55
HDAC6-226ENST00000483656 RCOR1Q9UKL0 485 aa11.64□□□□□ -0.55
HDAC6-226ENST00000483656 PNMA6FA0A0J9YX94 578 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 IQCA1LA6NCM1 817 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 FAM205CA6NFA0 338 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 TMEM232C9JQI7 657 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 M0R2N6 131 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 RAD21O60216 631 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 KRT2P35908 639 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 TOB1P50616 345 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-226ENST00000483656 NLRP5P59047 1200 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 NOL9Q5SY16 702 aaKnown RBP11.63□□□□□ -0.55
HDAC6-226ENST00000483656 HEATR3Q7Z4Q2 680 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.63□□□□□ -0.55
HDAC6-226ENST00000483656 CDCA5Q96FF9 252 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 ZNF396Q96N95 335 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-226ENST00000483656 WDR18Q9BV38 432 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 GOPCQ9HD26 462 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 RTEL1Q9NZ71 1219 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 CLIC4Q9Y696 253 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 DOCK1Q14185 1865 aa11.63□□□□□ -0.55
HDAC6-226ENST00000483656 ELP1O95163 1332 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 PAPPA2Q9BXP8 1791 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 PTPRAP18433 802 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 NASPP49321 788 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-226ENST00000483656 CEBPZQ03701 1054 aaKnown RBP11.62□□□□□ -0.55
HDAC6-226ENST00000483656 DGKZQ13574 1117 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 PRKG1Q13976 671 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 ZYXQ15942 572 aaKnown RBP11.62□□□□□ -0.55
HDAC6-226ENST00000483656 QRICH1Q2TAL8 776 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 EAPPQ56P03 285 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-226ENST00000483656 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 SYDE2Q5VT97 1194 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-226ENST00000483656 FAM177A1Q8N128 213 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-226ENST00000483656 DAGLBQ8NCG7 672 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 COA7Q96BR5 231 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 PGBD1Q96JS3 809 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 SPATA32Q96LK8 384 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 SCAND2PQ9GZW5 306 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-226ENST00000483656 KIAA1683Q9H0B3 1180 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 SEC63Q9UGP8 760 aaKnown RBP11.62□□□□□ -0.55
HDAC6-226ENST00000483656 CFAP45Q9UL16 551 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 PCDHA4Q9UN74 947 aa11.62□□□□□ -0.55
HDAC6-226ENST00000483656 ZBTB5O15062 677 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 PLA2G6O60733 806 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 HSPA6P17066 643 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 CALML3P27482 149 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 NAPAP54920 295 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 SNAP25P60880 206 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 MAP3K9P80192 1104 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 GNL2Q13823 731 aaKnown RBP11.61□□□□□ -0.55
HDAC6-226ENST00000483656 PTPAQ15257 358 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 KLHL40Q2TBA0 621 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 SKOR2Q2VWA4 1001 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-226ENST00000483656 ANO1Q5XXA6 986 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 PNMA8AQ86V59 439 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-226ENST00000483656 BLIDQ8IZY5 108 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 LINC00301Q8NCQ3 95 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 ZMYND12Q9H0C1 365 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 POLR3EQ9NVU0 708 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 PRR12Q9ULL5 1215 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
HDAC6-226ENST00000483656 SNCAIPQ9Y6H5 919 aa11.61□□□□□ -0.55
HDAC6-226ENST00000483656 PHIPQ8WWQ0 1821 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 ESYT2A0FGR8 921 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 SMCO2A6NFE2 343 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 hCG_1984214I3L0E3 225 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 WNT7AO00755 349 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 YEATS4O95619 227 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 UBE2HP62256 183 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 SPP2Q13103 211 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 SF3A1Q15459 793 aaKnown RBP11.6□□□□□ -0.55
HDAC6-226ENST00000483656 CDC37Q16543 378 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-226ENST00000483656 CSPP1Q1MSJ5 1256 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 GALNT17Q6IS24 598 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 MOB2Q70IA6 237 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 ZNF713Q8N859 430 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-226ENST00000483656 ZNF280CQ8ND82 737 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 CCDC148Q8NFR7 591 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 RASGRP4Q8TDF6 673 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 FEZ1Q99689 392 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 RRAGCQ9HB90 399 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 PICK1Q9NRD5 415 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 FBXO28Q9NVF7 368 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 PCDHA6Q9UN73 950 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 PCDHA8Q9Y5H6 950 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
HDAC6-226ENST00000483656 ZHX2Q9Y6X8 837 aa11.6□□□□□ -0.55
HDAC6-226ENST00000483656 WDR46O15213 610 aaKnown RBP11.59□□□□□ -0.55
HDAC6-226ENST00000483656 TAL1P17542 331 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-226ENST00000483656 BACE1P56817 501 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 FMR1Q06787 632 aaKnown RBP eCLIP11.59□□□□□ -0.55
HDAC6-226ENST00000483656 MTMR2Q13614 643 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms