RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 SLC38A10Q9HBR0 1119 aa23.56■■□□□ 1.36
HPS4-213ENST00000483631 FGRP09769 529 aa23.55■■□□□ 1.36
HPS4-213ENST00000483631 BMP3P12645 472 aa23.55■■□□□ 1.36
HPS4-213ENST00000483631 MCMDC2Q4G0Z9 681 aa23.55■■□□□ 1.36
HPS4-213ENST00000483631 SLFN13Q68D06 897 aa23.55■■□□□ 1.36
HPS4-213ENST00000483631 SNRNP48Q6IEG0 339 aaKnown RBP23.55■■□□□ 1.36
HPS4-213ENST00000483631 CCDC129Q6ZRS4 1044 aa23.55■■□□□ 1.36
HPS4-213ENST00000483631 GMCL1Q96IK5 515 aa23.55■■□□□ 1.36
HPS4-213ENST00000483631 LNPKQ9C0E8 428 aa23.55■■□□□ 1.36
HPS4-213ENST00000483631 OSBPL3Q9H4L5 887 aa23.55■■□□□ 1.36
HPS4-213ENST00000483631 ORC4O43929 436 aa23.54■■□□□ 1.36
HPS4-213ENST00000483631 FAM47AQ5JRC9 791 aa23.54■■□□□ 1.36
HPS4-213ENST00000483631 LRRC47Q8N1G4 583 aaKnown RBP23.54■■□□□ 1.36
HPS4-213ENST00000483631 TINF2Q9BSI4 451 aa23.54■■□□□ 1.36
HPS4-213ENST00000483631 TSPY2A6NKD2 308 aa23.53■■□□□ 1.36
HPS4-213ENST00000483631 PLA2G6O60733 806 aa23.53■■□□□ 1.36
HPS4-213ENST00000483631 NOVP48745 357 aa23.53■■□□□ 1.36
HPS4-213ENST00000483631 FAM160B2Q86V87 743 aa23.53■■□□□ 1.36
HPS4-213ENST00000483631 FBXO40Q9UH90 709 aa23.53■■□□□ 1.36
HPS4-213ENST00000483631 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
HPS4-213ENST00000483631 PGK2P07205 417 aa23.52■■□□□ 1.36
HPS4-213ENST00000483631 LRRC26Q2I0M4 334 aa23.52■■□□□ 1.36
HPS4-213ENST00000483631 VPS53Q5VIR6 699 aa23.52■■□□□ 1.36
HPS4-213ENST00000483631 CHD1LQ86WJ1 897 aa23.52■■□□□ 1.36
HPS4-213ENST00000483631 CHST13Q8NET6 341 aa23.52■■□□□ 1.36
HPS4-213ENST00000483631 CHURC1Q8WUH1 139 aa23.52■■□□□ 1.36
HPS4-213ENST00000483631 KIFC2Q96AC6 838 aa23.52■■□□□ 1.36
HPS4-213ENST00000483631 SENP6Q9GZR1 1112 aaPredicted RBP23.52■■□□□ 1.36
HPS4-213ENST00000483631 ZMYND8Q9ULU4 1186 aaPredicted RBP23.52■■□□□ 1.36
HPS4-213ENST00000483631 DNAJC25-GNG10A0A024R161 153 aa23.51■■□□□ 1.35
HPS4-213ENST00000483631 A0A0D9SFI3 127 aa23.51■■□□□ 1.35
HPS4-213ENST00000483631 KBTBD13C9JR72 458 aa23.51■■□□□ 1.35
HPS4-213ENST00000483631 STAT2P52630 851 aa23.51■■□□□ 1.35
HPS4-213ENST00000483631 NUCB1Q02818 461 aa23.51■■□□□ 1.35
HPS4-213ENST00000483631 CTDSPL2Q05D32 466 aa23.51■■□□□ 1.35
HPS4-213ENST00000483631 ZNF467Q7Z7K2 595 aaPredicted RBP23.51■■□□□ 1.35
HPS4-213ENST00000483631 FAM227BQ96M60 508 aa23.51■■□□□ 1.35
HPS4-213ENST00000483631 SYNGAP1Q96PV0 1343 aa23.51■■□□□ 1.35
HPS4-213ENST00000483631 TRIM6-TRIM34B2RNG4 842 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 FGAP02671 866 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 HSPD1P10809 573 aaKnown RBP23.5■■□□□ 1.35
HPS4-213ENST00000483631 PCP11498 1178 aaKnown RBP23.5■■□□□ 1.35
HPS4-213ENST00000483631 SLC1A4P43007 532 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 MFAP1P55081 439 aaKnown RBP23.5■■□□□ 1.35
HPS4-213ENST00000483631 MAMDC4Q6UXC1 1216 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 STAG1Q8WVM7 1258 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 DDX11Q96FC9 970 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 IL17RBQ9NRM6 502 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 STX8Q9UNK0 236 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 RIPK3Q9Y572 518 aa23.5■■□□□ 1.35
HPS4-213ENST00000483631 NT5C2P49902 561 aa23.49■■□□□ 1.35
HPS4-213ENST00000483631 PRAMEF19Q5SWL8 479 aa23.49■■□□□ 1.35
HPS4-213ENST00000483631 PLEKHM2Q8IWE5 1019 aa23.49■■□□□ 1.35
HPS4-213ENST00000483631 CPXCR1Q8N123 301 aa23.49■■□□□ 1.35
HPS4-213ENST00000483631 CNPY2Q9Y2B0 182 aa23.49■■□□□ 1.35
HPS4-213ENST00000483631 CCDC171Q6TFL3 1326 aa23.49■■□□□ 1.35
HPS4-213ENST00000483631 TMEM232C9JQI7 657 aa23.48■■□□□ 1.35
HPS4-213ENST00000483631 RANBP6O60518 1105 aaKnown RBP23.48■■□□□ 1.35
HPS4-213ENST00000483631 IGHDP01880 384 aa23.48■■□□□ 1.35
HPS4-213ENST00000483631 RARBP10826 455 aa23.48■■□□□ 1.35
HPS4-213ENST00000483631 NMIQ13287 307 aaPredicted RBP23.48■■□□□ 1.35
HPS4-213ENST00000483631 GJC2Q5T442 439 aaPredicted RBP23.48■■□□□ 1.35
HPS4-213ENST00000483631 B4GALNT3Q6L9W6 998 aa23.48■■□□□ 1.35
HPS4-213ENST00000483631 EXOC6Q8TAG9 804 aa23.48■■□□□ 1.35
HPS4-213ENST00000483631 RAVER2Q9HCJ3 691 aaKnown RBP23.48■■□□□ 1.35
HPS4-213ENST00000483631 TCP11L1Q9NUJ3 509 aa23.48■■□□□ 1.35
HPS4-213ENST00000483631 ZNF865P0CJ78 1059 aaPredicted RBP23.47■■□□□ 1.35
HPS4-213ENST00000483631 AKR1A1P14550 325 aa23.47■■□□□ 1.35
HPS4-213ENST00000483631 SYN1P17600 705 aa23.47■■□□□ 1.35
HPS4-213ENST00000483631 MAGEA10P43363 369 aaPredicted RBP23.47■■□□□ 1.35
HPS4-213ENST00000483631 SNX17Q15036 470 aa23.47■■□□□ 1.35
HPS4-213ENST00000483631 LRRC41Q15345 812 aa23.47■■□□□ 1.35
HPS4-213ENST00000483631 TKFCQ3LXA3 575 aa23.47■■□□□ 1.35
HPS4-213ENST00000483631 C1orf53Q5VUE5 145 aa23.47■■□□□ 1.35
HPS4-213ENST00000483631 RCSD1Q6JBY9 416 aa23.47■■□□□ 1.35
HPS4-213ENST00000483631 SDSP20132 328 aa23.46■■□□□ 1.35
HPS4-213ENST00000483631 ZNF589Q86UQ0 364 aaPredicted RBP23.46■■□□□ 1.35
HPS4-213ENST00000483631 ANKRD35Q8N283 1001 aa23.46■■□□□ 1.35
HPS4-213ENST00000483631 RILPL2Q969X0 211 aa23.46■■□□□ 1.35
HPS4-213ENST00000483631 TACC3Q9Y6A5 838 aa23.46■■□□□ 1.35
HPS4-213ENST00000483631 HIP1O00291 1037 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 MCCP23508 829 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 ANO1Q5XXA6 986 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 SLC39A5Q6ZMH5 540 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 RNF180Q86T96 592 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 DCAF4Q8WV16 495 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 ACAD9Q9H845 621 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 XPNPEP3Q9NQH7 507 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 INCENPQ9NQS7 918 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 MCM3APO60318 1980 aa23.45■■□□□ 1.34
HPS4-213ENST00000483631 NMT2O60551 498 aa23.44■■□□□ 1.34
HPS4-213ENST00000483631 RTP1P59025 263 aa23.44■■□□□ 1.34
HPS4-213ENST00000483631 PHF24Q9UPV7 400 aa23.44■■□□□ 1.34
HPS4-213ENST00000483631 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
HPS4-213ENST00000483631 ZNF536O15090 1300 aa23.43■■□□□ 1.34
HPS4-213ENST00000483631 SNAI1O95863 264 aaPredicted RBP23.43■■□□□ 1.34
HPS4-213ENST00000483631 TOP1P11387 765 aaKnown RBP23.43■■□□□ 1.34
HPS4-213ENST00000483631 ATN1P54259 1190 aaPredicted RBP23.43■■□□□ 1.34
HPS4-213ENST00000483631 IKQ13123 557 aaPredicted RBP23.43■■□□□ 1.34
HPS4-213ENST00000483631 LRIT3Q3SXY7 679 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms