RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 ANAPC4Q9UJX5 808 aa25.51■■□□□ 1.67
SYPL1-206ENST00000483448 PLIN4Q96Q06 1357 aa25.51■■□□□ 1.67
SYPL1-206ENST00000483448 HSPD1P10809 573 aaKnown RBP25.5■■□□□ 1.67
SYPL1-206ENST00000483448 SDSP20132 328 aa25.5■■□□□ 1.67
SYPL1-206ENST00000483448 MFAP1P55081 439 aaKnown RBP25.5■■□□□ 1.67
SYPL1-206ENST00000483448 RRP12Q5JTH9 1297 aaKnown RBP25.5■■□□□ 1.67
SYPL1-206ENST00000483448 PRAMEF19Q5SWL8 479 aa25.5■■□□□ 1.67
SYPL1-206ENST00000483448 TMEM232C9JQI7 657 aa25.49■■□□□ 1.67
SYPL1-206ENST00000483448 CYBAP13498 195 aa25.49■■□□□ 1.67
SYPL1-206ENST00000483448 SLC1A4P43007 532 aa25.49■■□□□ 1.67
SYPL1-206ENST00000483448 ZNF589Q86UQ0 364 aaPredicted RBP25.49■■□□□ 1.67
SYPL1-206ENST00000483448 DDX11Q96FC9 970 aa25.49■■□□□ 1.67
SYPL1-206ENST00000483448 OSBPL3Q9H4L5 887 aa25.49■■□□□ 1.67
SYPL1-206ENST00000483448 RAVER2Q9HCJ3 691 aaKnown RBP25.49■■□□□ 1.67
SYPL1-206ENST00000483448 MTMR7Q9Y216 660 aa25.49■■□□□ 1.67
SYPL1-206ENST00000483448 CCDC171Q6TFL3 1326 aa25.48■■□□□ 1.67
SYPL1-206ENST00000483448 MYH4Q9Y623 1939 aa25.48■■□□□ 1.67
SYPL1-206ENST00000483448 NMT2O60551 498 aa25.48■■□□□ 1.67
SYPL1-206ENST00000483448 MYCNP04198 464 aaPredicted RBP25.48■■□□□ 1.67
SYPL1-206ENST00000483448 MCCP23508 829 aa25.48■■□□□ 1.67
SYPL1-206ENST00000483448 IRX6P78412 446 aaPredicted RBP25.48■■□□□ 1.67
SYPL1-206ENST00000483448 ANO1Q5XXA6 986 aa25.48■■□□□ 1.67
SYPL1-206ENST00000483448 PARP14Q460N5 1801 aa25.48■■□□□ 1.67
SYPL1-206ENST00000483448 COL11A1P12107 1806 aaPredicted RBP25.47■■□□□ 1.67
SYPL1-206ENST00000483448 ORC4O43929 436 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 IGHA2P01877 340 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 CHURC1Q8WUH1 139 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 SLC38A10Q9HBR0 1119 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 IL17RBQ9NRM6 502 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 DIAPH3Q9NSV4 1193 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 RBM27Q9P2N5 1060 aaKnown RBP25.47■■□□□ 1.67
SYPL1-206ENST00000483448 RIPK3Q9Y572 518 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 TACC3Q9Y6A5 838 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 ZNF236Q9UL36 1845 aa25.47■■□□□ 1.67
SYPL1-206ENST00000483448 PFASO15067 1338 aa25.46■■□□□ 1.67
SYPL1-206ENST00000483448 STAT2P52630 851 aa25.46■■□□□ 1.67
SYPL1-206ENST00000483448 HAND2P61296 217 aa25.46■■□□□ 1.67
SYPL1-206ENST00000483448 GMCL1Q96IK5 515 aa25.46■■□□□ 1.67
SYPL1-206ENST00000483448 SENP6Q9GZR1 1112 aaPredicted RBP25.46■■□□□ 1.67
SYPL1-206ENST00000483448 ZMYND8Q9ULU4 1186 aaPredicted RBP25.46■■□□□ 1.67
SYPL1-206ENST00000483448 ATP2A1O14983 1001 aa25.45■■□□□ 1.66
SYPL1-206ENST00000483448 SEPT4O43236 478 aa25.45■■□□□ 1.66
SYPL1-206ENST00000483448 COL6A1P12109 1028 aa25.45■■□□□ 1.66
SYPL1-206ENST00000483448 ZNF792Q3KQV3 632 aa25.45■■□□□ 1.66
SYPL1-206ENST00000483448 CWC27Q6UX04 472 aaKnown RBP25.45■■□□□ 1.66
SYPL1-206ENST00000483448 FAM160B2Q86V87 743 aa25.45■■□□□ 1.66
SYPL1-206ENST00000483448 ARRDC4Q8NCT1 418 aa25.45■■□□□ 1.66
SYPL1-206ENST00000483448 STAG1Q8WVM7 1258 aa25.45■■□□□ 1.66
SYPL1-206ENST00000483448 DIS3Q9Y2L1 958 aaKnown RBP25.45■■□□□ 1.66
SYPL1-206ENST00000483448 GJC2Q5T442 439 aaPredicted RBP25.44■■□□□ 1.66
SYPL1-206ENST00000483448 KCTD1Q719H9 257 aa25.44■■□□□ 1.66
SYPL1-206ENST00000483448 TINF2Q9BSI4 451 aa25.44■■□□□ 1.66
SYPL1-206ENST00000483448 HIP1O00291 1037 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 FGRP09769 529 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 FDX1P10109 184 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 SYN1P17600 705 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 RCSD1Q6JBY9 416 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 MFSD6Q6ZSS7 791 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 ANKRD35Q8N283 1001 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 HOMER2Q9NSB8 354 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 FBXO40Q9UH90 709 aa25.43■■□□□ 1.66
SYPL1-206ENST00000483448 ZNFX1Q9P2E3 1918 aaKnown RBP25.43■■□□□ 1.66
SYPL1-206ENST00000483448 KBTBD13C9JR72 458 aa25.42■■□□□ 1.66
SYPL1-206ENST00000483448 DNM1LO00429 736 aa25.42■■□□□ 1.66
SYPL1-206ENST00000483448 OAZ1P54368 228 aa25.42■■□□□ 1.66
SYPL1-206ENST00000483448 LRRC26Q2I0M4 334 aa25.42■■□□□ 1.66
SYPL1-206ENST00000483448 CCDC96Q2M329 555 aa25.42■■□□□ 1.66
SYPL1-206ENST00000483448 CNPY2Q9Y2B0 182 aa25.42■■□□□ 1.66
SYPL1-206ENST00000483448 ZMYM6O95789 1325 aa25.41■■□□□ 1.66
SYPL1-206ENST00000483448 FXR1P51114 621 aaKnown RBP eCLIP25.41■■□□□ 1.66
SYPL1-206ENST00000483448 ATN1P54259 1190 aaPredicted RBP25.41■■□□□ 1.66
SYPL1-206ENST00000483448 AKNAD1Q5T1N1 836 aa25.41■■□□□ 1.66
SYPL1-206ENST00000483448 CHST13Q8NET6 341 aa25.41■■□□□ 1.66
SYPL1-206ENST00000483448 NRBP1Q9UHY1 535 aa25.41■■□□□ 1.66
SYPL1-206ENST00000483448 ZNF213O14771 459 aa25.4■■□□□ 1.66
SYPL1-206ENST00000483448 RNF41Q9H4P4 317 aaPredicted RBP25.4■■□□□ 1.66
SYPL1-206ENST00000483448 RARBP10826 455 aa25.39■■□□□ 1.66
SYPL1-206ENST00000483448 TOP1P11387 765 aaKnown RBP25.39■■□□□ 1.66
SYPL1-206ENST00000483448 TAL1P17542 331 aaPredicted RBP25.39■■□□□ 1.66
SYPL1-206ENST00000483448 SNAP25P60880 206 aa25.39■■□□□ 1.66
SYPL1-206ENST00000483448 CCDC174Q6PII3 467 aa25.39■■□□□ 1.66
SYPL1-206ENST00000483448 DCAF4Q8WV16 495 aa25.39■■□□□ 1.66
SYPL1-206ENST00000483448 AGBL1Q96MI9 1066 aa25.39■■□□□ 1.66
SYPL1-206ENST00000483448 ALPK3Q96L96 1907 aa25.38■■□□□ 1.65
SYPL1-206ENST00000483448 PLA2G6O60733 806 aa25.38■■□□□ 1.65
SYPL1-206ENST00000483448 PCP11498 1178 aaKnown RBP25.38■■□□□ 1.65
SYPL1-206ENST00000483448 TMEM47Q9BQJ4 181 aa25.38■■□□□ 1.65
SYPL1-206ENST00000483448 XPNPEP3Q9NQH7 507 aa25.38■■□□□ 1.65
SYPL1-206ENST00000483448 TCP11L1Q9NUJ3 509 aa25.38■■□□□ 1.65
SYPL1-206ENST00000483448 PRR12Q9ULL5 1215 aa25.38■■□□□ 1.65
SYPL1-206ENST00000483448 ALAS1P13196 640 aa25.37■■□□□ 1.65
SYPL1-206ENST00000483448 NOVP48745 357 aa25.37■■□□□ 1.65
SYPL1-206ENST00000483448 RASGRP2Q7LDG7 609 aa25.37■■□□□ 1.65
SYPL1-206ENST00000483448 TBC1D10CQ8IV04 446 aa25.37■■□□□ 1.65
SYPL1-206ENST00000483448 MSL3Q8N5Y2 521 aaKnown RBP25.37■■□□□ 1.65
SYPL1-206ENST00000483448 ESR2Q92731 530 aa25.37■■□□□ 1.65
SYPL1-206ENST00000483448 PRO3102Q9H379 93 aa25.37■■□□□ 1.65
SYPL1-206ENST00000483448 ACAD9Q9H845 621 aa25.37■■□□□ 1.65
SYPL1-206ENST00000483448 TRIOBPQ9H2D6 2365 aa25.36■■□□□ 1.65
SYPL1-206ENST00000483448 DNAJC25-GNG10A0A024R161 153 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms